Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 104 4e-16 seq1 86.0 1e-10 >seq2 Length=2348266 Score = 104 bits (114), Expect = 4e-16 Identities = 178/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| || ||||||| || |||||||||||| |||||| ||| ||| ||| Sbjct 511007 GTACTTGGTGACAGCTCTGGTACCTTCAGAGACGGCGTGCTTGGCCAATTCACCGGGCAA 510948 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| | ||||| ||||| ||||| | | || || |||||| || | Sbjct 510947 GATCAATCTAACGGCAGTCTGAATCTCTCTAGCAGAAATGGTAGACTTCTTGTT-GTAAG 510889 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| | ||||| |||| | || | || ||||||||||| ||||||| Sbjct 510888 CAGCCAACTTGGAAGCCTCACCAGCGATTCTTTCAAAGATATCGTTGACAAAAGAGTTCA 510829 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||||| | || | |||||| || ||| ||||| |||||| | ||||||| Sbjct 510828 TAATGGACATAGCCTTCTGGGAGATACCAGTGTCAGGGTGGGTCTGCTTCAAAACCTTGT 510769 Query 1485710 AAACAAAGGACGAGTA 1485725 ||| | || ||||| Sbjct 510768 AAATGTATGAAGAGTA 510753 >seq1 Length=2974285 Score = 86.0 bits (94), Expect = 1e-10 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 |||||||||| ||||||||||| | | |||||||||||||||||||| ||||| || Sbjct 232766 GGGTCCTTGATATAGGTGTCGATCAACAAGGAGTAGGTCTCTGAGTGGATATTTTCCATC 232707 Query 794644 GCGATCTGGAAGCCATAAAAGCAGTTG 794670 ||| ||||| || |||||||| ||| Sbjct 232706 ATGATTTGGAAACCGTAAAAGCATTTG 232680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244272508780