Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 104 4e-16
seq1 86.0 1e-10
>seq2
Length=2348266
Score = 104 bits (114), Expect = 4e-16
Identities = 178/256 (70%), Gaps = 2/256 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| || ||||||| || |||||||||||| |||||| ||| ||| |||
Sbjct 511007 GTACTTGGTGACAGCTCTGGTACCTTCAGAGACGGCGTGCTTGGCCAATTCACCGGGCAA 510948
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||||| | ||||| ||||| ||||| | | || || |||||| || |
Sbjct 510947 GATCAATCTAACGGCAGTCTGAATCTCTCTAGCAGAAATGGTAGACTTCTTGTT-GTAAG 510889
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| | ||||| |||| | || | || ||||||||||| |||||||
Sbjct 510888 CAGCCAACTTGGAAGCCTCACCAGCGATTCTTTCAAAGATATCGTTGACAAAAGAGTTCA 510829
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
| || ||||| | || | |||||| || ||| ||||| |||||| | |||||||
Sbjct 510828 TAATGGACATAGCCTTCTGGGAGATACCAGTGTCAGGGTGGGTCTGCTTCAAAACCTTGT 510769
Query 1485710 AAACAAAGGACGAGTA 1485725
||| | || |||||
Sbjct 510768 AAATGTATGAAGAGTA 510753
>seq1
Length=2974285
Score = 86.0 bits (94), Expect = 1e-10
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|||||||||| ||||||||||| | | |||||||||||||||||||| ||||| ||
Sbjct 232766 GGGTCCTTGATATAGGTGTCGATCAACAAGGAGTAGGTCTCTGAGTGGATATTTTCCATC 232707
Query 794644 GCGATCTGGAAGCCATAAAAGCAGTTG 794670
||| ||||| || |||||||| |||
Sbjct 232706 ATGATTTGGAAACCGTAAAAGCATTTG 232680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916244272508780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |