Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq1 84.2 3e-11
>seq1
Length=2974285
Score = 84.2 bits (92), Expect = 3e-11
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945
||||| ||||||||||| |||||| | | |||||| | ||||| | |||||||||
Sbjct 1617099 ATTAAAGTTGCTCAGTTAGTTGGTTATGTATCTGAACAAGCCCATTATCATCATGGTGAA 1617040
Query 172946 CAAAACCTTTG--TGAAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACA 173003
| || ||||| | || || || ||| || || ||||| | || |||| || |
Sbjct 1617039 C--AATCTTTGATTACTACAATTATTGGATTGGCCCAAAATTTTATTGGATCAAACAATA 1616982
Query 173004 TAACATTACTT-GAACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATTCA 173062
||| || ||| ||||| ||||| || ||||||||| || |||||| ||||| |
Sbjct 1616981 TAA-ATATCTTAAAACCAAATGGTGCTTTCGGTACTAGAGCTGCAGGAGGAAAAGACTTT 1616923
Query 173063 GCCGCATCAAGGTATATTTATAC 173085
| ||| |||| || |||| |||
Sbjct 1616922 TCTGCAGCAAGATACATTTTTAC 1616900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655279836180000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |