Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 3e-11 >seq1 Length=2974285 Score = 84.2 bits (92), Expect = 3e-11 Identities = 143/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 ||||| ||||||||||| |||||| | | |||||| | ||||| | ||||||||| Sbjct 1617099 ATTAAAGTTGCTCAGTTAGTTGGTTATGTATCTGAACAAGCCCATTATCATCATGGTGAA 1617040 Query 172946 CAAAACCTTTG--TGAAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACA 173003 | || ||||| | || || || ||| || || ||||| | || |||| || | Sbjct 1617039 C--AATCTTTGATTACTACAATTATTGGATTGGCCCAAAATTTTATTGGATCAAACAATA 1616982 Query 173004 TAACATTACTT-GAACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATTCA 173062 ||| || ||| ||||| ||||| || ||||||||| || |||||| ||||| | Sbjct 1616981 TAA-ATATCTTAAAACCAAATGGTGCTTTCGGTACTAGAGCTGCAGGAGGAAAAGACTTT 1616923 Query 173063 GCCGCATCAAGGTATATTTATAC 173085 | ||| |||| || |||| ||| Sbjct 1616922 TCTGCAGCAAGATACATTTTTAC 1616900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655279836180000