Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1 104 3e-17 >seq1 Length=2974285 Score = 104 bits (114), Expect = 3e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 |||||||||||||| ||| ||| ||||| | |||||| | ||||| | ||||||||| Sbjct 1617099 ATTAAAGTTGCTCAGTTAGTTGGTTATGTATCTGAACAAGCCCATTATCATCATGGTGAA 1617040 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 ||| ||| | || || ||| || |||||| ||||| |||| |||| |||||| Sbjct 1617039 CAATCTTTGATTACTACAATTATTGGATTGGCCCAAAATTTTATTGGATCAAACAATATA 1616980 Query 165280 GCATTACTT-GAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGC 165338 || ||| |||| ||||| || ||||| ||| | |||||| ||||| | | | Sbjct 1616979 -AATATCTTAAAACCAAATGGTGCTTTCGGTACTAGAGCTGCAGGAGGAAAAGACTTTTC 1616921 Query 165339 GGCATCAAGATATATTTATAC 165359 ||| ||||||| |||| ||| Sbjct 1616920 TGCAGCAAGATACATTTTTAC 1616900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531042867200