Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 4e-14
>seq1
Length=2974285
Score = 93.3 bits (102), Expect = 4e-14
Identities = 253/382 (66%), Gaps = 13/382 (3%)
Strand=Plus/Minus
Query 120370 TTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTG 120429
|| || |||||||| || || || ||| ||||||||| | |||||| || || || ||
Sbjct 233297 TTTTCGAAAAAGTTGGTCTTTCCTGCCAACGAAATGTTTTCCATAAAGTCAAAGGGATTA 233238
Query 120430 CTCGCGTT--AAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACAAACT 120487
| | || ||| ||||| | ||| || || || | || ||| || |||||||
Sbjct 233237 GTAACATTGTAAACCTTTTCG--TTGCCTAATGCGACAAGTAATCTGTCGGCAACAAACT 233180
Query 120488 CAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGCCGACG 120547
| | ||||| |||||| | | |||||| |||| ||||| | ||||| || |
Sbjct 233179 CCACGTACTGGCACATCAATTTACAGTTCATACCCAACAACGAAATAGGCAAAGCATCAG 233120
Query 120548 TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTG---AACATGGCGAGCATAGTGTGGC 120604
||||||||||||| ||||| | || ||||| || | | | ||| ||||
Sbjct 233119 TGAAAAACTCCTTTTCAATAGCAACGGCCTCTGTGATAATCTTCTCGACAATAGCAGCAT 233060
Query 120605 CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTCCGTGTGCAGGC 120664
|||| || ||| || | | | | | | ||| ||| ||||| || ||||||| |
Sbjct 233059 CGGG--TC-TGTTTTGCAAGTGGG---AGAATAACAAGCAAGCAAAATCGGTGTGCAAAC 233006
Query 120665 CCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCT 120724
|||| || || | || | ||||||| || |||| || ||||| | |||| || |||
Sbjct 233005 CCTCATCACGGCAGATTAACTCGTTGGAGAAAGTCAAACCAGGCATCAAGCCTCTCTTCT 232946
Query 120725 TGATGTAGAATATGGCGGCAAA 120746
| | | || |||| |||||
Sbjct 232945 TCAACCAAAAGATGGATGCAAA 232924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420679144800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |