Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=2974285 Score = 93.3 bits (102), Expect = 4e-14 Identities = 253/382 (66%), Gaps = 13/382 (3%) Strand=Plus/Minus Query 120370 TTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTG 120429 || || |||||||| || || || ||| ||||||||| | |||||| || || || || Sbjct 233297 TTTTCGAAAAAGTTGGTCTTTCCTGCCAACGAAATGTTTTCCATAAAGTCAAAGGGATTA 233238 Query 120430 CTCGCGTT--AAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACAAACT 120487 | | || ||| ||||| | ||| || || || | || ||| || ||||||| Sbjct 233237 GTAACATTGTAAACCTTTTCG--TTGCCTAATGCGACAAGTAATCTGTCGGCAACAAACT 233180 Query 120488 CAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGCCGACG 120547 | | ||||| |||||| | | |||||| |||| ||||| | ||||| || | Sbjct 233179 CCACGTACTGGCACATCAATTTACAGTTCATACCCAACAACGAAATAGGCAAAGCATCAG 233120 Query 120548 TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTG---AACATGGCGAGCATAGTGTGGC 120604 ||||||||||||| ||||| | || ||||| || | | | ||| |||| Sbjct 233119 TGAAAAACTCCTTTTCAATAGCAACGGCCTCTGTGATAATCTTCTCGACAATAGCAGCAT 233060 Query 120605 CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTCCGTGTGCAGGC 120664 |||| || ||| || | | | | | | ||| ||| ||||| || ||||||| | Sbjct 233059 CGGG--TC-TGTTTTGCAAGTGGG---AGAATAACAAGCAAGCAAAATCGGTGTGCAAAC 233006 Query 120665 CCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCT 120724 |||| || || | || | ||||||| || |||| || ||||| | |||| || ||| Sbjct 233005 CCTCATCACGGCAGATTAACTCGTTGGAGAAAGTCAAACCAGGCATCAAGCCTCTCTTCT 232946 Query 120725 TGATGTAGAATATGGCGGCAAA 120746 | | | || |||| ||||| Sbjct 232945 TCAACCAAAAGATGGATGCAAA 232924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420679144800