Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 2e-15
seq7 89.7 1e-12
>seq1
Length=2974285
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| ||| || | || |||||||| || || | || || ||| ||||||
Sbjct 1360814 CAAATCTTTGTCAAGACCTTGACTGGAAAAACTATTACCCTTGAGGTTGAATCCTCTGAC 1360755
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || || ||| || ||| ||
Sbjct 1360754 ACTATTGACAAMGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAGCAG 1360695
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || ||||| || ||||| || ||||||||||| || || | || ||||| |
Sbjct 1360694 AGATTGATTTTCGCTGGTAAGCAATTAGAAGATGGAAGAACGTTATCAGACTACAATATT 1360635
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || |||||||| ||||| ||||| ||||||
Sbjct 1360634 CAAAAGGAGTCTACGCTTCATCTTGTATTGAGA 1360602
>seq7
Length=860703
Score = 89.7 bits (98), Expect = 1e-12
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| | || ||||| ||| ||||| | || || |||
Sbjct 37657 ACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATTGACAATGTCAAGTCC 37716
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || || ||||| ||| || ||| |||||| | || || || || |||
Sbjct 37717 AAGATTCAGGACAAGGAAGGTATTCCCCCTGACCAGCAAAGATTGATTTTTGCTGGTAAG 37776
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||| || || | ||| | | || |||||| |||| || |||||||||||||||
Sbjct 37777 CAATTGGAGGACGGCCGTACTCTTTCTGACTACAACATCCAAAAGGAGTCTACTCTTCAC 37836
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 37837 TTGGTGTTGAGA 37848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820497158420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |