Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 seq7 89.7 1e-12 >seq1 Length=2974285 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || |||||||| || || | || || ||| |||||| Sbjct 1360814 CAAATCTTTGTCAAGACCTTGACTGGAAAAACTATTACCCTTGAGGTTGAATCCTCTGAC 1360755 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || ||| || ||| || Sbjct 1360754 ACTATTGACAAMGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAGCAG 1360695 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || ||||| || ||||| || ||||||||||| || || | || ||||| | Sbjct 1360694 AGATTGATTTTCGCTGGTAAGCAATTAGAAGATGGAAGAACGTTATCAGACTACAATATT 1360635 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || |||||||| ||||| ||||| |||||| Sbjct 1360634 CAAAAGGAGTCTACGCTTCATCTTGTATTGAGA 1360602 >seq7 Length=860703 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||| | || ||||| ||| ||||| | || || ||| Sbjct 37657 ACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATTGACAATGTCAAGTCC 37716 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || ||||| ||| || ||| |||||| | || || || || ||| Sbjct 37717 AAGATTCAGGACAAGGAAGGTATTCCCCCTGACCAGCAAAGATTGATTTTTGCTGGTAAG 37776 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||| || || | ||| | | || |||||| |||| || ||||||||||||||| Sbjct 37777 CAATTGGAGGACGGCCGTACTCTTTCTGACTACAACATCCAAAAGGAGTCTACTCTTCAC 37836 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 37837 TTGGTGTTGAGA 37848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820497158420