Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=2974285 Score = 82.4 bits (90), Expect = 7e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 146884 AAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTA 146943 ||||| | ||||| | ||| || || || |||| || | |||| || | |||| | Sbjct 200560 AAATAAGGGTTGACAATTTGGAATTCACCAGCCAATACTCTTCTGGAGTAGATATTGGAA 200501 Query 146944 GTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATG 147003 ||| | || ||||| |||| || || || |||||||||| |||| ||| || |||||| Sbjct 200500 GTGTAGGGTTCAAAGCACTCGTTGTTACCCAATATTTGGGAAGTGGATGCCGTGGGCATG 200441 Query 147004 TACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGC 147063 || ||||| || ||||||| | ||| | | | | || | ||| || || | | Sbjct 200440 GGAGCAACCAATAACGAATTTCTAATACCATGCTTAGCCAATTTTTGCTTTAATGTGTCC 200381 Query 147064 CAGTCCCACA 147073 |||||||||| Sbjct 200380 CAGTCCCACA 200371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611080847200