Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 3e-16
>seq1
Length=2974285
Score = 104 bits (114), Expect = 3e-16
Identities = 229/334 (69%), Gaps = 11/334 (3%)
Strand=Plus/Plus
Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGA 1455802
|| ||||| || ||||| || ||||| ||| ||| |||||||| | |||| | ||
Sbjct 232438 CGTTTTGTTCTTTTCCCTATTAAATACCACGAGATTTGGCAAATGTACAAGAAAG-CAGA 232496
Query 1455803 GGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTG-- 1455860
|| || |||||||| || ||||| |||| | || ||||| |||||
Sbjct 232497 AGCATCTTTTTGGACTGCAGAGGAAATCGATTTGGGAAAAGACACTCATGACTGGAACAA 232556
Query 1455861 TCGCT-GAGCGACGACGAGCGCCATTTCATCAAG-CACGTCCTC-GCCTTTTTTCGCCGC 1455917
||||| || |||| ||||||| |||| ||| | ||| | | | |||||||| ||
Sbjct 232557 TCGCTTGAACGACAACGAGCG---TTTCTTCATTTCCCGTATTTTGGCATTTTTCGCTGC 232613
Query 1455918 CAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT-TATGAAAGAGGTCCAATTGC 1455976
|||||| || || ||||||| ||| | ||| | || ||||| || | |
Sbjct 232614 TTCCGATGGTATTGTTAACGAGAACTTGGTGGAGAACTTCTCTGCC-GAGGTTCAGATTC 232672
Query 1455977 CAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCT 1456036
|||| || | |||||||| ||||| ||| || ||||| |||||||| || ||||
Sbjct 232673 CAGAAGCCAAATGCTTTTACGGTTTCCAAATCATGATGGAAAATATCCACTCAGAGACCT 232732
Query 1456037 ACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
|||| | ||||||||||||| ||||||||||
Sbjct 232733 ACTCCTTGTTGATCGACACCTATATCAAGGACCC 232766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177809270963240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |