Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 104 3e-16 >seq1 Length=2974285 Score = 104 bits (114), Expect = 3e-16 Identities = 229/334 (69%), Gaps = 11/334 (3%) Strand=Plus/Plus Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGA 1455802 || ||||| || ||||| || ||||| ||| ||| |||||||| | |||| | || Sbjct 232438 CGTTTTGTTCTTTTCCCTATTAAATACCACGAGATTTGGCAAATGTACAAGAAAG-CAGA 232496 Query 1455803 GGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTG-- 1455860 || || |||||||| || ||||| |||| | || ||||| ||||| Sbjct 232497 AGCATCTTTTTGGACTGCAGAGGAAATCGATTTGGGAAAAGACACTCATGACTGGAACAA 232556 Query 1455861 TCGCT-GAGCGACGACGAGCGCCATTTCATCAAG-CACGTCCTC-GCCTTTTTTCGCCGC 1455917 ||||| || |||| ||||||| |||| ||| | ||| | | | |||||||| || Sbjct 232557 TCGCTTGAACGACAACGAGCG---TTTCTTCATTTCCCGTATTTTGGCATTTTTCGCTGC 232613 Query 1455918 CAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT-TATGAAAGAGGTCCAATTGC 1455976 |||||| || || ||||||| ||| | ||| | || ||||| || | | Sbjct 232614 TTCCGATGGTATTGTTAACGAGAACTTGGTGGAGAACTTCTCTGCC-GAGGTTCAGATTC 232672 Query 1455977 CAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCT 1456036 |||| || | |||||||| ||||| ||| || ||||| |||||||| || |||| Sbjct 232673 CAGAAGCCAAATGCTTTTACGGTTTCCAAATCATGATGGAAAATATCCACTCAGAGACCT 232732 Query 1456037 ACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 |||| | ||||||||||||| |||||||||| Sbjct 232733 ACTCCTTGTTGATCGACACCTATATCAAGGACCC 232766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177809270963240