Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq7 114 1e-20
seq1 104 2e-17
>seq7
Length=860703
Score = 114 bits (126), Expect = 1e-20
Identities = 171/241 (71%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555
|||||| || ||||||| | || ||||||||||| || | ||| ||||||||| |
Sbjct 37872 TCTCTTC-TTACCACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGACTCCTTTTGGA 37814
Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615
||||||| || | | || || |||| |||| |||||||| ||||| ||||| | |
Sbjct 37813 TGTTGTAGTCAGAAAGAGTACGGCCGTCCTCCAATTGCTTACCAGCAAAAATCAATCTTT 37754
Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675
||||||| | |||| | ||||||||| ||||| ||| | | | | | ||||
Sbjct 37753 GCTGGTCAGGGGGAATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGT 37694
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
|| || |||||||| | ||||| || ||||| || || || || || || || ||||
Sbjct 37693 CGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTTAAGGTCTTGACGAAAATTTGCA 37634
Query 35736 T 35736
|
Sbjct 37633 T 37633
>seq1
Length=2974285
Score = 104 bits (114), Expect = 2e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| || | ||| | |||| |||||||||||| ||||| || |
Sbjct 1360591 CCACCTCTCAATCTCAATACAAGATGAAGCGTAGACTCCTTTTGAATATTGTAGTCTGAT 1360650
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || || | |||||||| || || ||||| | ||||||||| | |||
Sbjct 1360651 AACGTTCTTCCATCTTCTAATTGCTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTGGA 1360710
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| ||||| ||| | ||| | | ||||| ||||| ||
Sbjct 1360711 ATACCCTCCTTGTCCTGAATCTTGGACTTGA-CKTTGTCAATAGTGTCAGAGGATTCAAC 1360769
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | || || ||||| || ||||| || || ||||| || |||||
Sbjct 1360770 CTCAAGGGTAATAGTTTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1360817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793487301600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |