Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 223 4e-53
>seq1
Length=2974285
Score = 223 bits (246), Expect = 4e-53
Identities = 899/1406 (64%), Gaps = 39/1406 (3%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|||||||||| ||||| || ||||||||||| ||||||||||| ||||||| |||||
Sbjct 200512 TAGATATTGGAAGTGTAGGGTTCAAAGCACTCGTTGTTACCCAATATTTGGGAAGTGGAT 200453
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAATGCGTTC 118300
|| ||||||||||| || | | | || | | ||| | || | ||| ||
Sbjct 200452 GCCGTGGGCATGGGAGCAACCAATAACGAATTTCTAATACCATGCTTAGCCAATTT-TTG 200394
Query 118301 CTTGAGAGCGTCCCAGTCGTAGT------TGAGCTTTGTCTCCCCCTGCCACATATCAAA 118354
||| | | ||||||||| | || ||||| | |||| | | ||||||
Sbjct 200393 CTTTAATGTGTCCCAGTCCCACAACTCACTGGGCTTTCTGTCCC------AAAGATCAAA 200340
Query 118355 CTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTC 118414
||| | | ||| | ||| ||||| || ||||| | | || || | ||||| ||||
Sbjct 200339 CTGTAACAAACCCTTGGAGGCTGGAGACCCCTCGTAACTTTCGTAAGAACCCTCGACCTG 200280
Query 118415 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATT 118474
|||||||||| || || || | || |||| ||||| ||||| ||||| || |||
Sbjct 200279 CGCCAATTCGATACTGGCTTCCACTGCACCGTGGTACATGGTTTCGAAAATCTGAATATT 200220
Query 118475 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 118534
|| | | | || | | || ||||| | | || | ||||| |||| || |
Sbjct 200219 CAATTCTCTAGCTTGTTGCGAGTCAAAGGGCAATCTCAATGCCATAAAAGCATCTGCCAA 200160
Query 118535 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCA 118593
||| || ||||| | ||||||| | || ||||| ||||| ||| | || ||| |
Sbjct 200159 ACCCTGCACACCCAATGCAATTGGTCTATTCCTCATGTTAGATCTTTTG-GCT-TCTGGA 200102
Query 118594 -CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652
|||| ||||| || | ||| || | || || | || ||| |||||||| || | |
Sbjct 200101 ACGGGGTAAAAGTTACGATCAATGATTCTGTTCAAGTTACGGGTAACAACCTTGGTAACT 200042
Query 118653 TCATGAAGCTTTTC------GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGA 118706
||||||||||| || ||| || || | |||| | ||| || |||
Sbjct 200041 TCATGAAGCTTCTCAAAGTTGTACCACAAGTTGTTGCTGTCTTTTTCAACAAACGAGGGA 199982
Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766
|| ||||| || |||| ||||| |||| |||||| | ||| || | ||||
Sbjct 199981 AGTGCGATAGATGCCAAGTTACATACAGCAACCTCATCTGGCGAGGAGTATTCGACAATT 199922
Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826
|| ||||| || ||| || ||| ||||||||||||||||| | ||| | ||
Sbjct 199921 TCACAACACAAATTGGAAGATTTGATGACACCCAAGTTCTTTTGATTAGTTTTTTTATTG 199862
Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886
|| ||||| ||||| | |||| |||| || || || || ||||| | || | ||| ||
Sbjct 199861 CATGCATCTTTGTACAACATGAATGGGGTACCGGTTTCGGTTTGCGCCTCCAAAATGGCG 199802
Query 118887 TTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC---CTCGTACTTT 118943
| ||| | | ||| | ||| || || | | ||| ||||||||
Sbjct 199801 TACCATAATTTCTGAGCCTTGATAGT---CTTTCTTCCACGGTTTTCACGTTCGTACTTC 199745
Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003
||| | || |||||||| ||||| | || || | ||| | |||| || ||
Sbjct 199744 TCGTACAATGCCTCAAACTCATCACCGTAAACATCGGACAAACCTTGGGCCTCATTAGGA 199685
Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063
|||| | | ||| | | || || |||||| | |||||| || | ||| || |||||
Sbjct 199684 GAGAACAAGGTCCACTCAGCATTCTGCTCAACTCTCTTCATAAACAAGTCAGGAATCCAC 199625
Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123
| || | ||| | ||| | | |||||| | || ||||| | | ||
Sbjct 199624 AATGCTGGGAACAAATCTCTTGCCCTCATTTCTTCCTTACCATGATTCTTTCTAATATCG 199565
Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCC 119177
| || || | ||||||||||||||| ||||||| || | || | || || | |
Sbjct 199564 ATGAAATCAAAGATATCCGCGTGCCATGGTTCCAAATATAAGGCAAATGCACCGGGTCTC 199505
Query 119178 TTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGA 119237
|| | |||| |||| | || || | |||||| || || || | || ||| |||
Sbjct 199504 TT---ATTACCACCCTGATCCACGTAACGAGCAGTGTTATTGAAAACTCTAACCATAGGA 199448
Query 119238 ATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCG 119297
|||||||||| || || || || || ||| | | | | | | | |
Sbjct 199447 ATGATACCATTAGAGGTACCGTTGGTACCAGCAATGTAGGCACCAGTCGAGCGAATGTTG 199388
Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357
|| ||||| | ||||||||| || || | ||| || || || || | | | |
Sbjct 199387 TGTATGTGTAAACCAATACCTCCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTA 199328
Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417
| || || || || || || ||| | || | || || | ||||| |||||||||
Sbjct 199327 TCATAAATACCGTCAATAGAATCATCTTTCATAGCAATCAAAAAGCACGAGGACATTTGA 199268
Query 119418 GGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGAC 119477
|| ||||||||||||| || || | ||| || | ||||| | || | ||||||
Sbjct 199267 GGGTTGGGTGTACCAGCATTAAACAAAGTAGGCGAGCCGTGGGTAAAGTGTCTCTGGGAC 199208
Query 119478 ATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 119537
||| | | ||| || || | ||| ||||||||| || || |||||||| || | ||
Sbjct 199207 ATCATATTGTAAGTTTCAATGACTCTGGGAATGTCGTCACCATGAATACCAATGGCAACT 199148
Query 119538 CGCATAAACATGTATTGGGGTGTTTC 119563
| ||||| | || || ||| ||||
Sbjct 199147 CTCATAATTAAGTGCTGAGGTCTTTC 199122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435045391200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |