Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq6 91.5 1e-13
>seq6
Length=1507273
Score = 91.5 bits (100), Expect = 1e-13
Identities = 269/406 (66%), Gaps = 14/406 (3%)
Strand=Plus/Plus
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121
|| |||||||| || | | ||||| ||||| | |||||| | || ||| |||
Sbjct 987153 ACATAAAACTGGCAGAAAACATGGCATGGAGGTAAAGCCATTTTACTGAAATCTGCAGGG 987212
Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181
||||| || ||| ||| || | | || | |||||| || ||| || | |
Sbjct 987213 TTCCAAGCCGACATGATAATTCTTCGATCGTATGGGTTATTTTTGAGCTTGTTTATAACA 987272
Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGC 30240
| || |||||||| || ||| |||| | |||||||| ||| ||| |||| || ||
Sbjct 987273 TCCTGTAGCTGATCTACACCCTTCCCAGTGTAGTCTGTG-TCACAGTCTTTGTATTCGGC 987331
Query 30241 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC 30300
||| ||||| | ||| || ||||| || || ||||||| ||| ||||| | || ||
Sbjct 987332 TCCAAAATGGCGCCATTGAAACCCATAAACGGGTCCCAAGTCGCCCTCGCGGCGGT-CTG 987390
Query 30301 GAAGCCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT 30359
|||||| | ||| || | || | || ||||| | |||||||||||||| |||
Sbjct 987391 TGAGCCCCAACGAGTCTAAGTACTCACGAGACCCGTTTCCCTCCCAGATCTTTACACCCA 987450
Query 30360 TCTCAGAGAGCTC--TTTG-GAG--TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30414
|||| ||| |||| ||| | ||| | ||| || ||||| |||| || |
Sbjct 987451 CCTCA-----CTCAATTTGCGAGCATCGGTGCATCCTGCAACAAACCAAAGCAATTCATG 987505
Query 30415 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC 30460
| | ||| || |||| ||| |||| || || | || ||||||
Sbjct 987506 GATTATGGCTTTAGAAAACACCTTCTTAGTTGTCAAAAGTGGAAAC 987551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310300961840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |