Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 1e-13 >seq6 Length=1507273 Score = 91.5 bits (100), Expect = 1e-13 Identities = 269/406 (66%), Gaps = 14/406 (3%) Strand=Plus/Plus Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 || |||||||| || | | ||||| ||||| | |||||| | || ||| ||| Sbjct 987153 ACATAAAACTGGCAGAAAACATGGCATGGAGGTAAAGCCATTTTACTGAAATCTGCAGGG 987212 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181 ||||| || ||| ||| || | | || | |||||| || ||| || | | Sbjct 987213 TTCCAAGCCGACATGATAATTCTTCGATCGTATGGGTTATTTTTGAGCTTGTTTATAACA 987272 Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGC 30240 | || |||||||| || ||| |||| | |||||||| ||| ||| |||| || || Sbjct 987273 TCCTGTAGCTGATCTACACCCTTCCCAGTGTAGTCTGTG-TCACAGTCTTTGTATTCGGC 987331 Query 30241 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC 30300 ||| ||||| | ||| || ||||| || || ||||||| ||| ||||| | || || Sbjct 987332 TCCAAAATGGCGCCATTGAAACCCATAAACGGGTCCCAAGTCGCCCTCGCGGCGGT-CTG 987390 Query 30301 GAAGCCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT 30359 |||||| | ||| || | || | || ||||| | |||||||||||||| ||| Sbjct 987391 TGAGCCCCAACGAGTCTAAGTACTCACGAGACCCGTTTCCCTCCCAGATCTTTACACCCA 987450 Query 30360 TCTCAGAGAGCTC--TTTG-GAG--TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30414 |||| ||| |||| ||| | ||| | ||| || ||||| |||| || | Sbjct 987451 CCTCA-----CTCAATTTGCGAGCATCGGTGCATCCTGCAACAAACCAAAGCAATTCATG 987505 Query 30415 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC 30460 | | ||| || |||| ||| |||| || || | || |||||| Sbjct 987506 GATTATGGCTTTAGAAAACACCTTCTTAGTTGTCAAAAGTGGAAAC 987551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310300961840