Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1 260 1e-64
>seq1
Length=2974285
Score = 260 bits (288), Expect = 1e-64
Identities = 580/868 (67%), Gaps = 17/868 (2%)
Strand=Plus/Minus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| |||||||| || |||| ||||||||| || || || || ||| | ||
Sbjct 233328 AACACCAGCCTTTTGGTAGTCACTAACTCTCTTTTCGAAAAAGTTGGTCTTTCCTGCCAA 233269
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
|||||| ||||||||||| ||||| |||||||| | |||||| ||||| ||
Sbjct 233268 CGAAATGTTTTCCATAAAGTCAAAGGGATTAGTAACATTGTAAACCTTTTCGTTGCCTAA 233209
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
|| ||||| |||| ||| || ||||| || | ||||||| ||| | || ||||| ||
Sbjct 233208 TGCGACAAGTAATCTGTCGGCAACAAACTCCACGTACTGGCACATCAATTTACAGTTCAT 233149
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486
|| | || | ||| | || | || |||||||| | ||| |||| ||||| ||
Sbjct 233148 ACCCAACAACGAAATAGGCAAAGCATCAGTGAAAAACTCCTTTTCAATAGCAACGGCCTC 233089
Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAA 4546
|||||| || | | | || | | ||| | ||| |||| || || ||
Sbjct 233088 TGTGATAATCTTCTCGACAATAGCAGCATCGGGTCTGTTTTGCAAGTGGGAGAATAACAA 233029
Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606
|| |||||||| |||||||| || || | || || | ||||| || || || ||
Sbjct 233028 GCAAGCAAAATCGGTGTGCAAACCCTCATCACGGCAGATTAACTCGTTGGAGAAAGTCAA 232969
Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666
|| ||||| || |||||||| || | |||||| || | ||||| || ||| |||||
Sbjct 232968 ACCAGGCATCAAGCCTCTCTTCTTCAACCAAAAGATGGATGCAAACGATCCACTGAAGAA 232909
Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726
|| ||||| || || ||||| || || | || || || || || | ||| |
Sbjct 232908 AATACCTTCAACAGCAGCAAATGCAACAAGACGTTCGCCAAATAAG---GCCTCGTCATC 232852
Query 4727 A---ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783
| ||||| ||| ||||||| ||| || || || | ||| ||||| || | |||||
Sbjct 232851 ACTGATCCAGCGTAAAGCCCAGTCAGCCTTCTTTTTGATGCAAGGAATAGTCTCAATAGC 232792
Query 4784 GTTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839
|| ||||| | | | | || ||||| | ||||| ||||| || | | |
Sbjct 232791 ATTGAATAAAAAGTCTGCCTCCTTG----GGGTCCTTGATATAGGTGTCGATCAACAAGG 232736
Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899
|| | || || || |||||||| || || || || |||||||||||| | ||||
Sbjct 232735 AGTAGGTCTCTGAGTGGATATTTTCCATCATGATTTGGAAACCGTAAAAGCATTTGGCTT 232676
Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959
||| | ||||| ||| | | || | || || ||||| ||||| || ||||| ||
Sbjct 232675 CTGGAATCTGAACCTCGGCAGAGAAGTTCTCCACCAAGTTCTCGTTAACAATACCATCGG 232616
Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTT 5016
|| || ||||| ||||||| | | || || ||| | | |||| || | | |
Sbjct 232615 AAGCAGCGAAAAATGCCAAAATACGGGAAATGAAGAAACGCTCGTTGTCGTTCAAGCGAT 232556
Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076
| ||||||| | ||||| ||||| | ||| || |||||||||| || ||||
Sbjct 232555 TGTTCCAGTCATGAGTGTCTTTTCCCAAATCGATTTCCTCTGCAGTCCAAAAAGATGCTT 232496
Query 5077 CCGCTTTTTTGTACATAGACCAAATATC 5104
| ||||| |||||||| |||||| ||
Sbjct 232495 CTGCTTTCTTGTACATTTGCCAAATCTC 232468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049495906660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |