Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1 280 2e-70
>seq1
Length=2974285
Score = 280 bits (310), Expect = 2e-70
Identities = 1234/1929 (64%), Gaps = 32/1929 (2%)
Strand=Plus/Minus
Query 75706 ATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGT 75765
|| ||| || |||||||| ||||| |||| ||||||||||| | ||| ||||| ||
Sbjct 200558 ATAAGGGTTGACAATTTGGAATTCACCAGCCAATACTCTTCTGGAGTAGATATTGGAAGT 200499
Query 75766 ATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGG 75825
|| ||||| | | || ||||| ||||| ||||| | ||| || || || ||||| ||
Sbjct 200498 GTAGGGTTCAAAGCACTCGTTGTTACCCAATATTTGGGAAGTGGATGCCGTGGGCATGGG 200439
Query 75826 TGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCA 75885
|| |||||||| |||||| | |||||| | | ||| | |||| || | |||
Sbjct 200438 AGCAACCAATAACGAATTTCTAATACCATGCTTAGCCAATTTTTGCTTTA-ATGTGTCCC 200380
Query 75886 A-TCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAG 75944
| ||||| | || || ||||| ||||| | |||| | || ||| |
Sbjct 200379 AGTCCCACAACTCACTGGGCTTTCTGTCCCAAAGATCAAACTGTAACAAACCCTTGGAGG 200320
Query 75945 CATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCT 76004
| || || | || ||||||||| || || | || | |||| ||| || |
Sbjct 200319 CTGGAGACCCCTCGTAACTTTCGTAAGAACCCTCGACCTGCGCCAATTCGATACTGGCTT 200260
Query 76005 CTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGAC 76064
| | ||||||| || || ||||||||||||| |||| | ||| |||| |
Sbjct 200259 CCACTGCACCGTGGTACATGGTTTCGAAAATCTGAATATTCAATTCTCTAGCTTGTTGCG 200200
Query 76065 TATCAAAAGGATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCA 76123
||||| || ||| | || | ||||| |||||||| | ||||| || || | ||
Sbjct 200199 AGTCAAAGGGC-AATCTCAATGCCATAAAAGCATCTGCCAAACCCTGCACACCCAATGCA 200141
Query 76124 ATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCT 76183
|| ||||||| ||| | || || ||| |||||||||| |||||| | ||| |||
Sbjct 200140 ATTGGTCTATTCCTCATGTTAGATCTTTTGGCTTCTGGAACGGGGTAAAAGTTACGATCA 200081
Query 76184 ATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-- 76241
|| ||| | || | || | | ||| || || || || | || || ||| |
Sbjct 200080 ATGATTCTGTTCAAGTTACGGGTAACAACCTTGGTAACTTCATGAAGCTTCTCAAAGTTG 200021
Query 76242 -----CAAATTTT--CCATCTATC---ACAAACATATTAAGAGCTATAGATGCTAGATTA 76291
||| || | | ||| | |||||| ||| || |||||||| | |||
Sbjct 200020 TACCACAAGTTGTTGCTGTCTTTTTCAACAAACGAGGGAAGTGCGATAGATGCCAAGTTA 199961
Query 76292 CAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACAC 76351
|| || || ||||||| | || |||| | || || || | ||| | |
Sbjct 199960 CATACAGCAACCTCATCTGGCGAGGAGTATTCGACAATTTCACAACACAAATTGGAAGAT 199901
Query 76352 TTGAT-AGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAAC 76410
||||| | ||||| | || ||| || | ||||| || |||| || || || | |
Sbjct 199900 TTGATGACACCCAAGTTCTT-TTGATTAGTTTTTTTATTGCATGCATCTTTGTACAACAT 199842
Query 76411 AAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTT 76469
|| || || || ||||| | || | || | ||| | | ||| | ||| ||| |
Sbjct 199841 GAATGGGGTACCGGTTTCGGTTTGCGCCTCCAAAATGGCGTACCATAATT-TCTGAGCCT 199783
Query 76470 TTATTATAGATTTGTATCGCTTCTCTCTTTCATA-TTGT-GTATATAACCGTTCAAATTC 76527
| || | | | || || || | ||| || || | ||| | || ||||| ||
Sbjct 199782 TGATAGTCTTTCTTCCACGGTTTTCACGTTCGTACTTCTCGTACAATGCC--TCAAACTC 199725
Query 76528 ATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACC 76587
||| || ||||||| |||||| | ||||| ||| | | ||| | ||||||| |
Sbjct 199724 ATCACCGTAAACATCGGACAAACCTTGGGCCTCATTAGGAGAGAACAAGGTCCACTCAGC 199665
Query 76588 ATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647
|| | || ||| | |||||||| | ||||| ||||| | || || | |||||
Sbjct 199664 ATTCTGCTCAACTCTCTTCATAAACAAGTCAGGAATCCACAATGCTGGGAACAAATCTCT 199605
Query 76648 GGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGA 76707
| || |||||| || || ||||||| ||| ||| | ||| || | ||||| |
Sbjct 199604 TGCCCTCATTTCTTCCTTACCATGATTCTTTCTAATATCGATGAAATCAAAGATATCCGC 199545
Query 76708 ATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTAT 76767
||||||||||| | ||||| || | |||| |||| |||||||| |||||||| |
Sbjct 199544 GTGCCATGGTTCCAAATATAAGGCAAATGCACCGGGTCTCTTATTACCACCCTGATCCAC 199485
Query 76768 ATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATT 76827
|| | ||||||||||| ||||||| | ||| ||||| || || ||||| ||||| ||
Sbjct 199484 GTAACGAGCAGTGTTATTGAAAACTCTAACCATAGGAATGATACCATTAGAGGTACCGTT 199425
Query 76828 TGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC 76887
|| |||| ||| || ||| | ||||| || || || || || |||||
Sbjct 199424 GGTACCAGCAATGTAGGCACCAGTCGAGCGAATGTTGTGTATGTGTAAACCAATACCTCC 199365
Query 76888 TGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATC 76947
|| | || || || | ||||| ||||| || ||||| || || || ||| |||
Sbjct 199364 AGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTATCATAAATACCGTCAATAGAATC 199305
Query 76948 ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAA 77007
||| |||| || | ||| || ||||||||| | | || || ||||||||
Sbjct 199304 ATCTTTCATAGCAATCAAAAAGCACGAGGACATTTGAGGGTTGGGTGTACCAGCATTAAA 199245
Query 77008 CAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAAC 77067
||| ||||| || | || || || | | | || | | |||||| |||||||| ||
Sbjct 199244 CAAAGTAGGCGAGCCGTGGGTAAAGTGTCTCTGGGACATCATATTGTAAGTTTCAATGAC 199185
Query 77068 TGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCG 77127
| || || |||||| || | || || | ||| | | ||||||||||
Sbjct 199184 TCTGGGAATGTCGTCACCATGAATACCAATGGCAACTCTCATAATTAAGTGCTGAGGTCT 199125
Query 77128 TTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 77187
|||| | || ||| ||| | || | ||| ||| | || |||||||| ||||||||
Sbjct 199124 TTCTGCGACTTTGCCATTAATTCTTAAAAGGTAAGATCTCTCTAAAGTTTTGAAACCAAA 199065
Query 77188 ATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247
|| ||||| ||| || | || | | ||| | || | | | || || ||
Sbjct 199064 GTAATTGTAGTTAAAATCACGATCAAATACAATTGCAGAGTCCAAGTCATCAGCGTACTT 199005
Query 77248 GGTAACAATATC-CATG-ACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGA 77305
||||| ||| || ||| ||| || || || || || | | ||| |||| ||
Sbjct 199004 GGTAATAATGTCGTATGTTTCCTGG--GAGATCATAGGGGAGTGCAAACCAGTTTTGGGG 198947
Query 77306 TTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGT 77365
|||||||||| | | || || | | || ||| | ||| | |||| |||||
Sbjct 198946 TTAACATAGTCATACAACTCCTTACTAACACTTGAAAACTGCTTTGTAGTTTGTTTGTGC 198887
Query 77366 AGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAG 77425
| || || || || ||||| || || | || ||||| || || || ||||| ||
Sbjct 198886 AAGTTAGAAACAGCAATTCTTGCTGCCAAGATAGCATAATCTGGGTGGATAGTAGT-CAT 198828
Query 77426 GT-GGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAG 77484
|| || || | ||||| ||||| |||| | || ||||| ||||| || | || |
Sbjct 198827 GTATGCGGCAGTCTCTGCTGCTAAGTTATCAAGCTCAATAGTGGTAACACCTTGGTACAC 198768
Query 77485 CCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATA 77544
||| ||||||| | | |||| | | ||| || | || || || |||||
Sbjct 198767 ACCTGAAATAACTCTTTGAGTGATTTGCACGGCATCAACGTGATTGGAGTCTAAGCCATA 198708
Query 77545 ACATAAT-TTTCTAATACGAGATGTGATTTTATCAAACATGACATTCTCCTTACATCCAT 77603
||||||| | | || | | || || ||||||||||| |||| ||| || | ||||
Sbjct 198707 ACATAATCTCTGTACT-CTAGCAGTAATTTTATCAAAACGGACAGGCTCTTTGCGACCAT 198649
Query 77604 TTCGTTTAA 77612
|| |||||
Sbjct 198648 GTCTTTTAA 198640
Score = 228 bits (252), Expect = 1e-54
Identities = 586/891 (66%), Gaps = 6/891 (1%)
Strand=Plus/Minus
Query 46326 CATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 46385
|||||| || |||||||| |||| || | || |||||||| || || || ||| |
Sbjct 233331 CATAACACCAGCCTTTTGGTAGTCACTAACTCTCTTTTCGAAAAAGTTGGTCTTTCCTGC 233272
Query 46386 CAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCC 46445
||| || || ||||||||||| ||||| |||||||||||||| |||| |||| ||
Sbjct 233271 CAACGAAATGTTTTCCATAAAGTCAAAGGGATTAGTAACATTGTAAACCTTTTCGTTGCC 233212
Query 46446 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATT 46505
|||| | || | ||| || ||||| || || | ||| ||||| || ||| ||
Sbjct 233211 TAATGCGACAAGTAATCTGTCGGCAACAAACTCCACGTACTGGCACATCAATTTACAGTT 233152
Query 46506 CATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGC 46565
||| || | | | || | ||| || || | |||||| | |||||||| || ||
Sbjct 233151 CATACCCAACAACGAAATAGGCAAAGCATCAGTGAAAAACTCCTTTTCAATAGCAACGGC 233092
Query 46566 ATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625
|| | || ||| || | | || ||| | ||| || || |
Sbjct 233091 CTCTGTGATAATCTTCTCGACAATAGCAGCATCGGGTCTGTTTTGCAAGTGGGAGAATAA 233032
Query 46626 TAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 46685
|| || |||||||| || | || ||||| | | ||||| ||||| || || ||
Sbjct 233031 CAAGCAAGCAAAATCGGTGTGCAAACCCTCATCACGGCAGATTAACTCGTTGGAGAAAGT 232972
Query 46686 GAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAA 46745
| |||||||| | || | ||| || | |||||| || | || || |||||| ||
Sbjct 232971 CAAACCAGGCATCAAGCCTCTCTTCTTCAACCAAAAGATGGATGCAAACGATCCACTGAA 232912
Query 46746 GAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG 46805
||| || ||||| ||||| || ||||| ||||| | || || | ||| || | ||
Sbjct 232911 GAAAATACCTTCAACAGCAGCAAATGCAACAAGACGTTCGCCAAATAAGGCCTCGTCATC 232852
Query 46806 A---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862
| ||||| | | |||||| |||||||| || || | ||||| || || || |||||
Sbjct 232851 ACTGATCCAGCGTAAAGCCCAGTCAGCCTTCTTTTTGATGCAAGGAATAGTCTCAATAGC 232792
Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATA 46922
||| || | ||||| | || | || || | ||| || || || || | ||
Sbjct 232791 ATTGAATAAAAAGTCTGCCTCCTTGGGGTCCTTGATATAGGTGTCGATCAACAAGGAGTA 232732
Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982
| ||||| || || ||||| || || || || |||||||| ||| | ||||| |
Sbjct 232731 GGTCTCTGAGTGGATATTTTCCATCATGATTTGGAAACCGTAAAAGCATTTGGCTTCTGG 232672
Query 46983 AATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042
|||||| ||||| | | | || || ||| ||||| || || || ||||| |||
Sbjct 232671 AATCTGAACCTCGGCAGAGAAGTTCTCCACCAAGTTCTCGTTAACAATACCATCGGAAGC 232612
Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATT 47099
||| ||||||||||| | | | ||| || | || | | ||| | || ||
Sbjct 232611 AGCGAAAAATGCCAAAATACGGGAAATGAAGAAACGCTCGTTGTCGTTCAAGCGATTGTT 232552
Query 47100 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159
|||||||| | |||||| | ||| | ||| || || ||||| || || || |||||
Sbjct 232551 CCAGTCATGAGTGTCTTTTCCCAAATCGATTTCCTCTGCAGTCCAAAAAGATGCTTCTGC 232492
Query 47160 TTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
||| || ||||| | ||| || || | |||| || || |||| ||||||
Sbjct 232491 TTTCTTGTACATTTGCCAAATCTCGTGGTATTTAATAGGGAAAAGAACAAA 232441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934221766400
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