Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 1e-27
>seq1
Length=2974285
Score = 138 bits (152), Expect = 1e-27
Identities = 559/873 (64%), Gaps = 21/873 (2%)
Strand=Plus/Minus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264
||||||||| ||||| || || | ||| | |||||||||| || ||||| || |
Sbjct 233331 CATAACACCAGCCTTTTGGTAGTCACTAACTCTCTTTTCGAAAAAGTTGGTCTTTCCTGC 233272
Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324
|| || || ||||||||||| ||||| ||||||| | ||| || || |||| | |
Sbjct 233271 CAACGAAATGTTTTCCATAAAGTCAAAGGGATTAGTAACATTGTAAAC--CTTTTCGTTG 233214
Query 23325 --TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382
|||| | | | || || || ||||| || | || || |||||||| | | ||
Sbjct 233213 CCTAATGCGACAAGTAATCTGTCGGCAACAAACTCCACGTACTGGCACATCAATTTACAG 233154
Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442
|| ||||| | | | || | |||||| || || |||||||| | |||
Sbjct 233153 TTCATACCCAACAACGAAATAGGCAAAGCATCAGTGAAAAACTCCTTTTCAATAGCAACG 233094
Query 23443 GCATCTTTAATTATTTGA---ACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTA 23499
|| ||| | || || | |||||| | | || ||| | || || |
Sbjct 233093 GCCTCTGTGATAATCTTCTCGACAATAGCAGCATCG---GGTCTGTTTTGCAAGTGGGAG 233037
Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559
|| || || || |||||||| || | || ||||| | | || || || || ||
Sbjct 233036 AATAACAAGCAAGCAAAATCGGTGTGCAAACCCTCATCACGGCAGATTAACTCGTTGGAG 232977
Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619
|| || || || ||||| || |||| || || | |||||| || | ||||| |||||
Sbjct 232976 AAAGTCAAACCAGGCATCAAGCCTCTCTTCTTCAACCAAAAGATGGATGCAAACGATCCA 232917
Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679
||||||||||| |||||||| ||||| || ||||||||| |||||| || |
Sbjct 232916 CTGAAGAAAATACCTTCAACAGCAGCAAATGCAACAAGACGTTCGCCAAATAAGGCCTCG 232857
Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739
| |||| ||||| | | ||| | ||||||| ||| | || ||| || |||
Sbjct 232856 TCATCACTGATCCAGCGTAAAGCCCAGTCAGCCTTCTTTTTGATGCAAGGAATAGTCTCA 232797
Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTAGT 23796
|| || || || | ||||| | | | || || || | ||||| || || || |
Sbjct 232796 ATAGCATTGAATA-AAAAG--TCTGCCTCCTTGGGGTCCTTGATATAGGTGTCGATCAAC 232740
Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856
|| || | || || || |||||||| || || || || || ||||| ||| |
Sbjct 232739 AAGGAGTAGGTCTCTGAGTGGATATTTTCCATCATGATTTGGAAACCGTAAAAGCATTTG 232680
Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916
||||| | | ||||| || | | || | | | || || |||||||||||||||
Sbjct 232679 GCTTCTGGAATCTGAACCTCGGCAGAGAAGTTCTCCACCAAGTTCTCGTTAACAATACCA 232620
Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACA----TATTTTATAAAATGTCTTTCATCAGTTGA 23972
|| |||||| || || || | || | | | | ||| || || || | |
Sbjct 232619 TCGGAAGCAGCGAAAAATGCCAAAATACGGGAAATGAAGAAACGCTCGTT-GTCGTTCAA 232561
Query 23973 TAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACT 24032
|| ||||| |||| | | |||||| ||||| | ||| || | |||||||||
Sbjct 232560 GCGATTGTTCCAGTCATGAGTGTCTTTTCCCAAATCGATTTCCTCTGCAGTCCAAAAAGA 232501
Query 24033 TGCCAAGGCACGCTTATACATTAGCCAAATATC 24065
||| || ||| |||||| ||||||| ||
Sbjct 232500 TGCTTCTGCTTTCTTGTACATTTGCCAAATCTC 232468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487869628000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |