Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 9e-18
>seq6
Length=1507273
Score = 105 bits (116), Expect = 9e-18
Identities = 287/440 (65%), Gaps = 22/440 (5%)
Strand=Plus/Minus
Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534
|| || || ||||| ||||| || ||||||||| | ||||||||||| |||| | |
Sbjct 987376 GGCGACTTGGGACCCGTTTATGGGTTTCAATGGCGCCATTTTGGAGCCGAATACAAAGAC 987317
Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGTTG 50594
|| ||| | | ||| || | || || ||||| || || | |||||| | | |
Sbjct 987316 TGTGACACAGACTACACTGGGAAGGGTGTAGATCAGCTACAGGATGTTATAAACAAGCTC 987257
Query 50595 AAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAGAT 50654
|||| ||||| ||||||| | ||| | ||| | || ||||| || | ||| | |
Sbjct 987256 AAAAATAACCCATACGATCGAAGAATTATCATGTCGGCTTGGAACCCTGCAGATTTCAGT 987197
Query 50655 CAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG--------CCACAGACA 50706
||| | ||||||||| || |||||||| || || ||||||| ||| | |
Sbjct 987196 AAAATGGCTTTACCTCCATGCCATGTTTTCTGCCAGTTTTATGTTAACTTTCCAGAATCC 987137
Query 50707 ATGTTT----------TATCCTGTCAATGTTATCAAAGATCAGCT--GATATGGGTTTAG 50754
|| | |||| ||| || || | || ||| | |||||||| || |
Sbjct 987136 CCGTCTAAACCTAAGCTATCGTGTTTATTGTACC--AGCGCAGTTGCGATATGGGATTGG 987079
Query 50755 GCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCG 50814
| ||||| || || | || || ||||| || | || | |||| || || || |
Sbjct 987078 GTGTTCCATTTAATATTGCATCATACGCGTTGCTCACAAAAATGATTGCCCATATAGTGG 987019
Query 50815 ATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACG 50874
||||| | || ||||||||||| || ||||| ||||| ||| |||| | || ||
Sbjct 987018 ATATGGATTGTGGTGAATTTATTCACACCTTAGGTGACGCGCATGTTTATTTGGACCATA 986959
Query 50875 TCGATGCTTTAAAGGAGCAA 50894
| ||||| || |||| |||
Sbjct 986958 TAGATGCATTGGAGGAACAA 986939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667075033231200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |