Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq6 105 9e-18 >seq6 Length=1507273 Score = 105 bits (116), Expect = 9e-18 Identities = 287/440 (65%), Gaps = 22/440 (5%) Strand=Plus/Minus Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534 || || || ||||| ||||| || ||||||||| | ||||||||||| |||| | | Sbjct 987376 GGCGACTTGGGACCCGTTTATGGGTTTCAATGGCGCCATTTTGGAGCCGAATACAAAGAC 987317 Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGTTG 50594 || ||| | | ||| || | || || ||||| || || | |||||| | | | Sbjct 987316 TGTGACACAGACTACACTGGGAAGGGTGTAGATCAGCTACAGGATGTTATAAACAAGCTC 987257 Query 50595 AAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAGAT 50654 |||| ||||| ||||||| | ||| | ||| | || ||||| || | ||| | | Sbjct 987256 AAAAATAACCCATACGATCGAAGAATTATCATGTCGGCTTGGAACCCTGCAGATTTCAGT 987197 Query 50655 CAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG--------CCACAGACA 50706 ||| | ||||||||| || |||||||| || || ||||||| ||| | | Sbjct 987196 AAAATGGCTTTACCTCCATGCCATGTTTTCTGCCAGTTTTATGTTAACTTTCCAGAATCC 987137 Query 50707 ATGTTT----------TATCCTGTCAATGTTATCAAAGATCAGCT--GATATGGGTTTAG 50754 || | |||| ||| || || | || ||| | |||||||| || | Sbjct 987136 CCGTCTAAACCTAAGCTATCGTGTTTATTGTACC--AGCGCAGTTGCGATATGGGATTGG 987079 Query 50755 GCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCG 50814 | ||||| || || | || || ||||| || | || | |||| || || || | Sbjct 987078 GTGTTCCATTTAATATTGCATCATACGCGTTGCTCACAAAAATGATTGCCCATATAGTGG 987019 Query 50815 ATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACG 50874 ||||| | || ||||||||||| || ||||| ||||| ||| |||| | || || Sbjct 987018 ATATGGATTGTGGTGAATTTATTCACACCTTAGGTGACGCGCATGTTTATTTGGACCATA 986959 Query 50875 TCGATGCTTTAAAGGAGCAA 50894 | ||||| || |||| ||| Sbjct 986958 TAGATGCATTGGAGGAACAA 986939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075033231200