Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03- 01] 20 sequences; 13,178,500 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 6e-12 >seq7 Length=860703 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| || || || |||||| || ||||| ||||| || || || || |||| Sbjct 37844 AACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCC 37785 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | ||||| || || || |||| | || ||||| | ||||| | ||||||||| Sbjct 37784 TCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGGGGAATACCTTCCTTGTCC 37725 Query 41771 ATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || | | || | || | ||||| ||||||||||| | || || || Sbjct 37724 -TGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 37666 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || | ||||| |||||||| |||||| Sbjct 37665 CTTACCGGTTAAGGTCTTGACGAAAATTTGCATG 37632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303884424000