Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 1e-19
>seq3
Length=2099697
Score = 113 bits (124), Expect = 1e-19
Identities = 179/254 (70%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
|| || || || || ||||| | ||| ||||| ||| | ||| || | || || |
Sbjct 1027997 ATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCC-GTATC 1028055
Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
||| | |||||||| || | || ||| | |||||||| || ||||| ||||||||| |
Sbjct 1028056 TCTTTTGGGCATGAATGCAAAGCTCATGTGCCAGTACATTGAGTTCGTTGCCGACCGCTT 1028115
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| || || ||||| | || ||||||| | | ||||||||||| || |||||
Sbjct 1028116 GCTCGTGGCTCTTGGCCATCCCAAGGTGTACAGCGTTGCGAACCCCTTTGATTTCATGGA 1028175
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
| || |||||| || |||||||||||||| || ||||| ||| ||||| ||||
Sbjct 1028176 GAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAGAAGCGAGTCTCGGACTACCAGAA 1028235
Query 230625 GCCTGGTGTGATGA 230638
| ||||| ||||
Sbjct 1028236 AGCAGGTGTCATGA 1028249
Score = 95.1 bits (104), Expect = 3e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 319810 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 319869
|| |||| |||||| || |||||| | || || | ||||| || ||||| ||||||
Sbjct 1705000 CCATCGATATCGTGCTCGACGTAAACGGTCTTTAGCTCATCCTGCGACGGGAAGCCTTCA 1705059
Query 319870 AGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACAC 319929
| |||||| | ||||||| ||||| || || || ||||| || || || || |||||
Sbjct 1705060 ACCTGGCCCTCAGCAATAGCACGCATAAGCGTCGACTTACCAGCACCATTAGGACCACAG 1705119
Query 319930 AGACCGTAGCGG 319941
||||||||||||
Sbjct 1705120 AGACCGTAGCGG 1705131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823945786520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |