Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 113 1e-19 >seq3 Length=2099697 Score = 113 bits (124), Expect = 1e-19 Identities = 179/254 (70%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 || || || || || ||||| | ||| ||||| ||| | ||| || | || || | Sbjct 1027997 ATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCC-GTATC 1028055 Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| | |||||||| || | || ||| | |||||||| || ||||| ||||||||| | Sbjct 1028056 TCTTTTGGGCATGAATGCAAAGCTCATGTGCCAGTACATTGAGTTCGTTGCCGACCGCTT 1028115 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | || || ||||| | || ||||||| | | ||||||||||| || ||||| Sbjct 1028116 GCTCGTGGCTCTTGGCCATCCCAAGGTGTACAGCGTTGCGAACCCCTTTGATTTCATGGA 1028175 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | || |||||| || |||||||||||||| || ||||| ||| ||||| |||| Sbjct 1028176 GAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAGAAGCGAGTCTCGGACTACCAGAA 1028235 Query 230625 GCCTGGTGTGATGA 230638 | ||||| |||| Sbjct 1028236 AGCAGGTGTCATGA 1028249 Score = 95.1 bits (104), Expect = 3e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 319810 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 319869 || |||| |||||| || |||||| | || || | ||||| || ||||| |||||| Sbjct 1705000 CCATCGATATCGTGCTCGACGTAAACGGTCTTTAGCTCATCCTGCGACGGGAAGCCTTCA 1705059 Query 319870 AGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACAC 319929 | |||||| | ||||||| ||||| || || || ||||| || || || || ||||| Sbjct 1705060 ACCTGGCCCTCAGCAATAGCACGCATAAGCGTCGACTTACCAGCACCATTAGGACCACAG 1705119 Query 319930 AGACCGTAGCGG 319941 |||||||||||| Sbjct 1705120 AGACCGTAGCGG 1705131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823945786520