Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 178 2e-39 >seq1 Length=3734243 Score = 178 bits (196), Expect = 2e-39 Identities = 1341/2144 (63%), Gaps = 63/2144 (3%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| || || || ||||| || | | || || | || ||||| || ||||| ||| Sbjct 740691 GTGAACTGGATTGGCGCGGAAGCTGCCTGAGTGCGCAAGTAATACATACCGGTTTTGAGA 740750 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA-TCTGCTAT 52926 || | ||| || ||||| ||||| || || || ||| | ||| ||||| || Sbjct 740751 CCCTTAGACCAACCATAAAAGTGCATGCTGGTCAGCTTGCCCATTGTAGGACTCTGC-AT 740809 Query 52927 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 52986 | ||||| | |||||| ||||||||| || || | | ||||| ||||| | || Sbjct 740810 GTATATATTGAGAGATTGGGATTGATCGATAAACGCGGCACGATCTGCGGCCATGTCAAT 740869 Query 52987 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 53046 ||||| || || ||| ||||| | || || || | |||| | || || |||| Sbjct 740870 GATCGCTTTCTGGCTAATCTCCCAGACTGTCTTGTACAGCTGCTTCAGTTCATCAGGAA- 740928 Query 53047 GTTTG------TATTCTGAATAGATCCACCATCTACCATA-ATCCTATTCTTGATCTCAT 53099 ||| || |||||| ||||| || ||| || || | ||||| || |||| Sbjct 740929 --TTGACGGGATAGACTGAATTGATCCTCCG-CTAGCAACGATACGGTTCTTCATGTCAT 740985 Query 53100 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 53159 | ||||| ||| | ||| ||| | | || | || || || || ||||| || | Sbjct 740986 CGTTCCACAATCCCATTTCGACCAAATCCTTGAGCAAATATGGGTTCACGACTTGGAACT 741045 Query 53160 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTAT 53219 | || | ||| || | || | ||||| || || || || || | | |||||| Sbjct 741046 CACCTGCCAAAACACGACGCGAATAAATGTTTGACGTGTAAGGCTCGAAGCATTCATTAA 741105 Query 53220 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 53279 |||||||| || | || || ||||| ||||| |||||||| || || | | || Sbjct 741106 AGCCCAAAATCTGGGAGGTGGAAGCAGTGGGCATTGGTGCCAC-AAGAAGCGAGTTGCGC 741164 Query 53280 GACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGATCCGACGGTAC 53337 ||| ||| || | | | | |||| | |||||| ||||||||| || || Sbjct 741165 AACCC-ATGCTCAGCCATCGACGACTTGAGGGTGTCCCAATCCCAAAGATCTGAAGGGGT 741223 Query 53338 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTA--CGATCCTACATATGTA 53395 ||| || || || | ||| | | |||||| ||| | Sbjct 741224 AACACCCCAGAGGTCAAACTGCAGCTGGCCCT--CTGAAGCAGGCGATCCAGGATAAGAC 741281 Query 53396 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 53455 || || | || || | ||||||| || || || || | || ||| || || Sbjct 741282 TCATAGTGACCATCTCTAGCAGCTAGCTCTACGCTAGCTTCAATAGCGGCGTGGTATATT 741341 Query 53456 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 53515 || || || || | |||| || || | || || ||||||| || || || || | Sbjct 741342 GTCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGGCTATCGAACGGCAAACGTA-G 741400 Query 53516 AGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 53574 || | | || | ||| || || ||||| ||||||| | | ||||| | ||| | | | || Sbjct 741401 AGCAAAGAATGTGTCGGCCAAACCTTGGACACCAAGAGCAATAGGGCGATGGCGCATGTT 741460 Query 53575 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCT 53634 ||| ||| || |||| ||| || || || | || ||||| |||||||| | Sbjct 741461 TGAGCGACGAGCCTCAGGAACAGGGTAGTAGTTCTTCTCAATAATGCAGTTGAGGTTCCG 741520 Query 53635 GACAATTACTTTGACCACATCCTTCAG-TTTGAGAAA--ATCAAATTGTCCATC------ 53685 || | || || ||||||| | || |||| ||| || | | |||| | Sbjct 741521 AACTAGAACCTTAGCCACATCATGGAGCTTTGCGAAGTTATAGAGTACTCCACCATCGCG 741580 Query 53686 -TATTACAAACA--TGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGC 53742 | | | | || | || || || |||| || ||||| || || || | | Sbjct 741581 CTGCTCGAGGTAGCTGGGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTCTGG 741640 Query 53743 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 53802 || | | | ||||| ||||||||| || |||||| || || || || | Sbjct 741641 GCTCGAGAACTCGACAATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTT 741700 Query 53803 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAAT 53862 ||| ||| ||| || |||||||| || || || | || |||| || ||| | Sbjct 741701 TTGGTTAGACTTACGATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGT 741760 Query 53863 CTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA----GATTTGTATC 53918 |||| ||| | ||| || | ||| | | ||||| || || || | || | Sbjct 741761 TTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTGCCTTGATGGTACGACGACCTTTACC 741820 Query 53919 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCA 53978 | ||||| | | | ||| |||| || || ||||| || | || | | | | Sbjct 741821 TAGCTTCTCGTACTT----TGTGTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTA 741876 Query 53979 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 54038 ||||||||||| |||||||| | | ||| ||||| || || || || || |||| Sbjct 741877 GACCAGGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCA 741936 Query 54039 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 54098 | || | ||| |||||||| ||||| | |||| ||||| | | | ||||| |||| Sbjct 741937 TGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTC 741996 Query 54099 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 54158 | ||| || | ||| | ||| | | | ||| ||||||||| || || || | Sbjct 741997 CATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAA 742056 Query 54159 TGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 54218 | | | | | || || || || || || || ||||| | ||||| ||| || ||||| | Sbjct 742057 TTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGT 742116 Query 54219 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 54278 | || | |||||| || | |||||||||| | ||| || || || | ||||| | Sbjct 742117 ACACACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCAATATATGAGC 742176 Query 54279 CACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338 | | || ||||| || ||| ||||| || ||||| || |||||||| | | Sbjct 742177 CTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCG 742236 Query 54339 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 54398 | || || |||||||| || || || || || ||||||| ||| | || | | Sbjct 742237 CACAAGTCTTCAACGTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGA 742296 Query 54399 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458 |||| ||||| || || || || |||||| | |||||||| ||||||| Sbjct 742297 AACATGAGGACATCTGCGCCTGAGGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCG 742356 Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT-GA-GTCTAT-ATCCCATT 54515 | ||| || | | || | || ||||| | | || || | | | ||||| Sbjct 742357 TGAACATCTTCTGGCTCATAAGTTCATAAGTCTCCAAAACTCGAGGGATGTCATCCC--- 742413 Query 54516 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT-TGTTG 54574 ||| ||||| | | |||||||| | ||||||||| || | ||| || || | | Sbjct 742414 CATGGATTCCAATAGATACACGCATAATCATGTGCTGTGGGCGTTC-GTGAACTCTACCG 742472 Query 54575 TTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 54634 || | || || | ||| || || |||||||| || ||||| | ||||| ||| Sbjct 742473 TTCAGCTTGAGAAGGTATGACCGCTCTAAAGTTTTGAAGCCAAAGAAATTGTAATTGAAG 742532 Query 54635 TCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTA---TATTTGTTAACTACATCC 54691 || || ||||||| || | ||||| | || ||| | | | || | ||||| | || Sbjct 742533 TCACGGTCGTAAACGATCGCAGAGTTCAATTCATCTTCATGCTGTTGGATAACTTC--CC 742590 Query 54692 ATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAA 54750 | | | ||| || || || || || ||||| | | | ||||| ||||| | | Sbjct 742591 AAACT--TCCTTGGATATCATAGGTGAGTGTTTGTTAGTATGGGGATTAACATACTCGTA 742648 Query 54751 TAAAT--CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 54808 || || | | | || | | ||| | || || || | ||| || | || || || Sbjct 742649 TAGATCGCGTGCTACAGTGGA--GAATTGCTTCTTAGTCTGTTTATGCAAGTTCGAAACA 742706 Query 54809 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 54868 || || | || |||||||| |||||||| |||||| || || | ||| ||| | Sbjct 742707 GCAATACGGGCTGCTAGAATCGCATAATCTGGATGTACAGTCGTCATATAGGCGGCTGTC 742766 Query 54869 TCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912 || |||| ||| |||| | ||| || || || ||||| || || Sbjct 742767 TCAGCTGCAAGATTGTCTAGTTCCACTGTAGTCACTCCGTTGTA 742810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721570313920