Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 1e-19
seq1 109 5e-19
seq3 89.7 4e-13
>seq2
Length=2224469
Score = 111 bits (122), Expect = 1e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| |||||||| ||||| || | || || ||||||
Sbjct 961550 CACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCCTC 961491
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| |||| ||||||||||| || || || ||||||||||| || |
Sbjct 961490 TAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGC 961431
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || || | ||| |||| ||||| ||||||| || | || ||
Sbjct 961430 AATCTTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTCTT 961371
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| || || || || || ||||||||||| |||
Sbjct 961370 GCCCGTTAGCGTCTTCACGAAAATCTGCATCGCT 961337
>seq1
Length=3734243
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | ||||||||| ||||| |||||||| || | || || ||| ||
Sbjct 2696313 CACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGGCCATCTTC 2696254
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
| ||| || || ||| | ||||| ||||||||||| ||||| || ||||| ||||| |
Sbjct 2696253 CAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCTTTGTCGGC 2696194
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || ||||| |||| || |||| || |||||||| | || | || ||
Sbjct 2696193 AATCTTGCTCTTAACGGCATCGATCGTATCCGAACTTTCGACCTCAAGAGTGATGGTCTT 2696134
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || || || |||||||||||
Sbjct 2696133 GCCCGTGAGGGTCTTCACGAAAATCTGCAT 2696104
>seq3
Length=2099697
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45086 ATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAAT 45145
||||||| |||||| | |||| || || |||| ||| | |||| ||||| || ||
Sbjct 1028018 ATCGAGAAGGAATTCCTCACTGATGCGCTCCCCGTATCTCTTTTGGGCATGAATGCAAAG 1028077
Query 45146 ATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCC 45205
| ||| | ||||||||||||| || ||||| || | ||||| | |||||
Sbjct 1028078 CTCATGTGCCAGTACATTGAGTTCGTTGCCGACCGCTTGCTCGTGGCTCTTGGCCATCCC 1028137
Query 45206 AAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAA 45265
||| ||||| || |||||| || || || ||| | ||||| ||| | | ||| ||
Sbjct 1028138 AAGGTGTACAGCGTTGCGAACCCCTTTGATTTCATGGAGAATATCTCGCTTGCGGGTAAG 1028197
Query 45266 ACTAAtttttttGAGAAACGCGTC 45289
|| || || |||||||| || |||
Sbjct 1028198 ACCAACTTCTTTGAGAAGCGAGTC 1028221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830378850768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |