Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 134 9e-27 seq2 111 1e-19 >seq1 Length=3734243 Score = 134 bits (148), Expect = 9e-27 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | ||| || || || ||||||||||| || ||| |||| | || Sbjct 2696315 AGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGGCCATCT 2696256 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGT 34295 |||||||||||||| ||||||||||| |||||||| || || || || |||| |||| Sbjct 2696255 TCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCT--TTGT 2696198 Query 34296 CGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 |||| ||||| ||| | | | |||| ||| | |||||| || | ||||||| Sbjct 2696197 CGGCAATCTTGCTCTTAACGGCATCGATCGTATCCGAACTTTCGACCTCAAGAGTGATGG 2696138 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | ||||| ||||| || ||||| || ||||||||| Sbjct 2696137 TCTTGCCCGTGAGGGTCTTCACGAAAATCTGCATC 2696103 >seq2 Length=2224469 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||||| ||| || || || || |||||||| || || ||| | || Sbjct 961552 AGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCC 961493 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || || || ||||||||||| ||| | || |||||| ||| Sbjct 961492 TCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCG 961433 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 || ||||| ||| | | || | || | ||| | || || || | ||| ||||| Sbjct 961432 GCAATCTTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTC 961373 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 ||||| || || || ||||| || |||||||||||| Sbjct 961372 TTGCCCGTTAGCGTCTTCACGAAAATCTGCATCGCT 961337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071984250240