Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1 134 9e-27
seq2 111 1e-19
>seq1
Length=3734243
Score = 134 bits (148), Expect = 9e-27
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||| ||||| | ||| || || || ||||||||||| || ||| |||| | ||
Sbjct 2696315 AGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGGCCATCT 2696256
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGT 34295
|||||||||||||| ||||||||||| |||||||| || || || || |||| ||||
Sbjct 2696255 TCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCT--TTGT 2696198
Query 34296 CGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
|||| ||||| ||| | | | |||| ||| | |||||| || | |||||||
Sbjct 2696197 CGGCAATCTTGCTCTTAACGGCATCGATCGTATCCGAACTTTCGACCTCAAGAGTGATGG 2696138
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
| ||||| ||||| || ||||| || |||||||||
Sbjct 2696137 TCTTGCCCGTGAGGGTCTTCACGAAAATCTGCATC 2696103
>seq2
Length=2224469
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||| ||||||| ||| || || || || |||||||| || || ||| | ||
Sbjct 961552 AGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCC 961493
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| || || || || ||||||||||| ||| | || |||||| |||
Sbjct 961492 TCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCG 961433
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|| ||||| ||| | | || | || | ||| | || || || | ||| |||||
Sbjct 961432 GCAATCTTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTC 961373
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393
||||| || || || ||||| || ||||||||||||
Sbjct 961372 TTGCCCGTTAGCGTCTTCACGAAAATCTGCATCGCT 961337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071984250240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |