Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-16 >seq3 Length=2099697 Score = 100 bits (110), Expect = 3e-16 Identities = 284/434 (65%), Gaps = 2/434 (0%) Strand=Plus/Minus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||||||| ||||| ||||| || | | |||| ||| || |||||||||||| Sbjct 1027944 CAAGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGA 1027885 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| || || || || || | ||| || || || || || || || ||||| Sbjct 1027884 CCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAG 1027825 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 || || ||||| || ||||| || || | ||||| | | | | | | | || Sbjct 1027824 ATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATG-TGGACTCGCGATCACT 1027766 Query 16415 -atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473 ||||| ||||| || || |||| || ||| ||| |||| || ||||| Sbjct 1027765 GATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATT 1027706 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 || | | | | ||||| ||| |||||| || || || || | || | Sbjct 1027705 GAACAGGTGCTGTGCCTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGTGAGTAAGT 1027646 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 || || |||||||||||||| || || || |||||||| || | || || | || Sbjct 1027645 CTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCCTCAGGGAT 1027586 Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 ||| |||||| | |||| || | | ||| ||||| || || || ||| ||||| Sbjct 1027585 TTGCACTTCACCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGCTGC 1027526 Query 16654 AAAAAACGCAAGTA 16667 ||||| || |||| Sbjct 1027525 GAAAAATGCGAGTA 1027512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511976874400