Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 3e-16
>seq3
Length=2099697
Score = 100 bits (110), Expect = 3e-16
Identities = 284/434 (65%), Gaps = 2/434 (0%)
Strand=Plus/Minus
Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294
|||||||||||| ||||| ||||| || | | |||| ||| || ||||||||||||
Sbjct 1027944 CAAGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGA 1027885
Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354
|| ||||| || || || || || | ||| || || || || || || || |||||
Sbjct 1027884 CCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAG 1027825
Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414
|| || ||||| || ||||| || || | ||||| | | | | | | | ||
Sbjct 1027824 ATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATG-TGGACTCGCGATCACT 1027766
Query 16415 -atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473
||||| ||||| || || |||| || ||| ||| |||| || |||||
Sbjct 1027765 GATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATT 1027706
Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533
|| | | | | ||||| ||| |||||| || || || || | || |
Sbjct 1027705 GAACAGGTGCTGTGCCTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGTGAGTAAGT 1027646
Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593
|| || |||||||||||||| || || || |||||||| || | || || | ||
Sbjct 1027645 CTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCCTCAGGGAT 1027586
Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653
||| |||||| | |||| || | | ||| ||||| || || || ||| |||||
Sbjct 1027585 TTGCACTTCACCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGCTGC 1027526
Query 16654 AAAAAACGCAAGTA 16667
||||| || ||||
Sbjct 1027525 GAAAAATGCGAGTA 1027512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511976874400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |