Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
seq2 89.7 4e-13
>seq1
Length=3734243
Score = 95.1 bits (104), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||| || ||||||||||| || || | || |||| || || ||||||||
Sbjct 2696295 CTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGGCCATCTTCCAACTGCTTGCCGGCGAA 2696236
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| || || ||||| | |||||| ||||| ||||| || |||||| ||
Sbjct 2696235 AATGAGTCGCTGCTGATCAGGAGGGATACCCTCTTTGTCGGCAATCTTGCTCTTAACGGC 2696176
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | ||| || || ||||| | || || ||||||||||| || ||||||||
Sbjct 2696175 ATCGATCGTATCCGAACTTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCAC 2696116
Query 45325 AAAGATTTGCATGTT 45339
|| || ||||| ||
Sbjct 2696115 GAAAATCTGCATCTT 2696101
>seq2
Length=2224469
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||| ||||| |||||||| || || | || || || || || || || ||
Sbjct 961532 CTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCCTCTAGCTGCTTGCCAGCAAA 961473
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| ||||| || || | |||||||| || ||||| || ||| || ||
Sbjct 961472 GATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGCAATCTTGCTCTTGACAGC 961413
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | ||| || ||| ||||| | ||||| ||||||||||| || ||||||||
Sbjct 961412 GTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTCTTGCCCGTTAGCGTCTTCAC 961353
Query 45325 AAAGATTTGCAT 45336
|| || |||||
Sbjct 961352 GAAAATCTGCAT 961341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075180740084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |