Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-16 >seq3 Length=2099697 Score = 100 bits (110), Expect = 3e-16 Identities = 545/866 (63%), Gaps = 9/866 (1%) Strand=Plus/Minus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 |||| || ||||||||||| || ||||| | || || ||||| ||||| |||||||| Sbjct 1028220 ACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAAG 1028161 Query 13988 GGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATG 14047 || || | | |||| || | || || | | || || | || |||| | Sbjct 1028160 GGGTTCGCAACGCTGTACACCTTGGGATGGCCAAGAGCCACGAGCAAGCGGTCGGCAACG 1028101 Query 14048 AACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATA 14107 |||||||| || || |||| | | |||||| || | || ||| || | | Sbjct 1028100 AACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGATACGGGGAGCGCA 1028041 Query 14108 TTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCA 14167 | || | ||||| || || || || ||||| | ||||| | || || ||| Sbjct 1028040 TCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGCTCGATGATCTCA 1027981 Query 14168 TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCC 14227 || || | | || || || | || | | || ||||||||| ||| | || Sbjct 1027980 CGCGACGGGCGGTTTTCAAGGTGCGTGAACAAGAGGCAAGCAAAATCAGTATGCATACCT 1027921 Query 14228 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 14287 ||||| | | ||| || || || |||||||| | || ||||| | || || || ||| Sbjct 1027920 TCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCATGAGGCCGCGCTTCTTT 1027861 Query 14288 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14347 | ||| || || ||||| || || || ||||| || |||||||| ||||||||||| Sbjct 1027860 AGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCCCTCAACAGCAGCAAACGCC 1027801 Query 14348 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCATTTTCTAGCCCATTCAGA 14406 | | || ||| |||| | || | | || | ||||| ||||| | || Sbjct 1027800 ACAAGGCGCTCTGCAAATG-TGGACTCGCGATCACTGATCCAGCGCAACGCCCACTTAGC 1027742 Query 14407 tttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAG- 14465 ||||| ||| | || || ||||| ||||| || | || | |||||| | Sbjct 1027741 CTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAACAGGTGCTGTGCCTCTTTCGG 1027682 Query 14466 -TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14524 | ||| ||| ||||| ||||| || | || | || ||||| || || ||||| Sbjct 1027681 ATCCTT--AATATATGTGTCAATCAGGAGTGAGTAAGTCTCCGAGTGAATATTCTCCATC 1027624 Query 14525 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTT 14584 || || || ||||||||||| | || || | ||| || || | || | Sbjct 1027623 ATGATTTGGAATCCATAAAAACACTTTGCCTCAGGGATTTGCACTTCACCAGAGAACCGC 1027564 Query 14585 TCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTA 14644 || ||| || || || || || || || ||||| |||||||| | || || | Sbjct 1027563 TCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGCTGCGAAAAATGCGAGTACATTCGAA 1027504 Query 14645 ATAAAGTATTGCTCTTCATTG---CTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGA 14701 || ||| || |||| || ||| || | || | ||| || ||||||||| ||| Sbjct 1027503 ATGAAGAATCGCTCATCCTTGTTCATGCGATTGTCCCAGTCATTCAAATCCTTACCGAGA 1027444 Query 14702 TCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCT 14761 || | || || | ||||| ||| || | ||||| |||||| ||| ||||| Sbjct 1027443 TCAATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGCTTTCTTATACGCCTGCCAAATTTCA 1027384 Query 14762 TTATATAATATAGGAAAAACTACAAA 14787 | || |||||||| | |||||| Sbjct 1027383 TGGTACCTGATAGGAAATAGTACAAA 1027358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345575882720