Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 3e-16
>seq3
Length=2099697
Score = 100 bits (110), Expect = 3e-16
Identities = 545/866 (63%), Gaps = 9/866 (1%)
Strand=Plus/Minus
Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987
|||| || ||||||||||| || ||||| | || || ||||| ||||| ||||||||
Sbjct 1028220 ACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAAG 1028161
Query 13988 GGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATG 14047
|| || | | |||| || | || || | | || || | || |||| |
Sbjct 1028160 GGGTTCGCAACGCTGTACACCTTGGGATGGCCAAGAGCCACGAGCAAGCGGTCGGCAACG 1028101
Query 14048 AACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATA 14107
|||||||| || || |||| | | |||||| || | || ||| || | |
Sbjct 1028100 AACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGATACGGGGAGCGCA 1028041
Query 14108 TTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCA 14167
| || | ||||| || || || || ||||| | ||||| | || || |||
Sbjct 1028040 TCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGCTCGATGATCTCA 1027981
Query 14168 TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCC 14227
|| || | | || || || | || | | || ||||||||| ||| | ||
Sbjct 1027980 CGCGACGGGCGGTTTTCAAGGTGCGTGAACAAGAGGCAAGCAAAATCAGTATGCATACCT 1027921
Query 14228 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 14287
||||| | | ||| || || || |||||||| | || ||||| | || || || |||
Sbjct 1027920 TCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCATGAGGCCGCGCTTCTTT 1027861
Query 14288 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14347
| ||| || || ||||| || || || ||||| || |||||||| |||||||||||
Sbjct 1027860 AGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCCCTCAACAGCAGCAAACGCC 1027801
Query 14348 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCATTTTCTAGCCCATTCAGA 14406
| | || ||| |||| | || | | || | ||||| ||||| | ||
Sbjct 1027800 ACAAGGCGCTCTGCAAATG-TGGACTCGCGATCACTGATCCAGCGCAACGCCCACTTAGC 1027742
Query 14407 tttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAG- 14465
||||| ||| | || || ||||| ||||| || | || | |||||| |
Sbjct 1027741 CTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAACAGGTGCTGTGCCTCTTTCGG 1027682
Query 14466 -TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14524
| ||| ||| ||||| ||||| || | || | || ||||| || || |||||
Sbjct 1027681 ATCCTT--AATATATGTGTCAATCAGGAGTGAGTAAGTCTCCGAGTGAATATTCTCCATC 1027624
Query 14525 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTT 14584
|| || || ||||||||||| | || || | ||| || || | || |
Sbjct 1027623 ATGATTTGGAATCCATAAAAACACTTTGCCTCAGGGATTTGCACTTCACCAGAGAACCGC 1027564
Query 14585 TCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTA 14644
|| ||| || || || || || || || ||||| |||||||| | || || |
Sbjct 1027563 TCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGCTGCGAAAAATGCGAGTACATTCGAA 1027504
Query 14645 ATAAAGTATTGCTCTTCATTG---CTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGA 14701
|| ||| || |||| || ||| || | || | ||| || ||||||||| |||
Sbjct 1027503 ATGAAGAATCGCTCATCCTTGTTCATGCGATTGTCCCAGTCATTCAAATCCTTACCGAGA 1027444
Query 14702 TCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCT 14761
|| | || || | ||||| ||| || | ||||| |||||| ||| |||||
Sbjct 1027443 TCAATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGCTTTCTTATACGCCTGCCAAATTTCA 1027384
Query 14762 TTATATAATATAGGAAAAACTACAAA 14787
| || |||||||| | ||||||
Sbjct 1027383 TGGTACCTGATAGGAAATAGTACAAA 1027358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345575882720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |