Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 250 2e-61 seq3 203 3e-47 seq2 86.0 6e-12 >seq1 Length=3734243 Score = 250 bits (276), Expect = 2e-61 Identities = 639/966 (66%), Gaps = 14/966 (1%) Strand=Plus/Plus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 ||||| ||||| | ||||| || || || |||||| | || | |||| ||||| ||| Sbjct 741603 GCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTCTGGGCTCGAGAACTCGACAATCTCG 741662 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140 || |||||| || ||| || || ||||| || | ||||| || |||||| Sbjct 741663 CAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACGATTGGCA 741722 Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200 | ||||||||||||||| ||||| | || ||||| || | || | || || | Sbjct 741723 GCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAATTGCGTAC 741782 Query 23201 CACATAGTCTGAGCGTGAAC---ACGTCGCACGT-ACCTGCCTTCTTCCTCGTACTTTTG 23256 |||| | || || | | ||| || | | |||| ||||| |||||||| Sbjct 741783 CACAGTTTTTGTGCCTTGATGGTACGACGACCTTTACCTAGCTTCT----CGTACTTTGT 741838 Query 23257 GTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACA 23316 ||||| | | || |||||| |||| || |||||| || || || ||| | ||||| Sbjct 741839 GTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTAGACCAGGACATTCGCTTGGACA 741898 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 ||| ||| |||| | || | || |||||| |||| || | ||| || |||||||| Sbjct 741899 CATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAATCCATAG 741958 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 ||| ||| | || || || || | ||||||||| || || || |||||| | Sbjct 741959 AGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCAAATCAAT 742018 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||| || || ||||| ||||||||||||| | |||| || || || ||||| | ||| Sbjct 742019 AAACTCAAATACGTCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCGGGCGCTT 742078 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 ||||||||| ||||| ||||| || || || || |||||||| | | ||| |||| | Sbjct 742079 ATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACACACGCAACATGGGCAAAAT 742138 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 ||| ||| | ||| | || || | | || ||| | || |||| |||||||| Sbjct 742139 ACCATTGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGTAGCGCGAATGTTGTGAAT 742198 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 | || ||| || || || | || || || || | ||| || |||| || ||||| Sbjct 742199 ATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTCAACGTATCGTA 742258 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 || || || || || || | | ||||||||||| || ||||| ||||| | Sbjct 742259 AATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGAAACATGAGGACATCTGCGCCTG 742318 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCG-ACATTA 23795 |||||| | || ||| || |||||||||||||| || ||| | | ||| | Sbjct 742319 AGGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCGTGAA-CATCTTCTGGCTCATAA 742377 Query 23796 GATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCA 23855 | | || || || | | | ||||| || || || || || || | || |||| Sbjct 742378 GTTCATAAGTCTCCAAAACTCGAGGGATGTCATCCCCATGGATTCCAATAGATACACGCA 742437 Query 23856 TCATCATGTATTGAGGTC--TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACG 23913 | ||||||| || || | || || | | ||||| | |||| || ||||| || Sbjct 742438 TAATCATGTGCTGTGGGCGTTCGTGAACTCTA--CCGTTCAGCTTGAGAAGGTATGACCG 742495 Query 23914 TTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 | | ||||| || ||||| | | || || |||||||| |||| || || || || Sbjct 742496 CTCTAAAGTTTTGAAGCCAAAGAAATTGTAATTGAAGTCACGGTCGTAAACGATCGCAGA 742555 Query 23974 ATTCAA 23979 ||||| Sbjct 742556 GTTCAA 742561 Score = 122 bits (134), Expect = 8e-23 Identities = 335/511 (66%), Gaps = 8/511 (2%) Strand=Plus/Plus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 ||||| | |||||||| || || || |||||| | ||| | ||||| || || Sbjct 740721 GTGCGCAAGTAATACATACCGGTTTTGAGACCCTTAGACCAACCATAAAAGTGCATGCTG 740780 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATA 22264 |||| || || | || | |||||| | ||||| || || ||||||||| Sbjct 740781 GTCAGCTTGCCCATTGTAGGACTCTGCATGTATATATTGAGAGATTGGGATTGATCGATA 740840 Query 22265 AACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATC--GAC--ATTTCCCATAC 22320 ||||| | ||||| |||||||| | ||||| ||| | | | || ||||| || Sbjct 740841 AACGCGGCACGATCTGCGGCCATGT----CAATGATCGCTTTCTGGCTAATCTCCCAGAC 740896 Query 22321 GGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTT 22380 ||||||||||| ||| | | || || || || ||| ||| | || || Sbjct 740897 TGTCTTGTACAGCTGCTTCAGTTCATCAGGAATTGACGGGATAGACTGAATTGATCCTCC 740956 Query 22381 ATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTT 22440 | | ||| || || || |||||||||||| || || || |||||| || Sbjct 740957 GCTAGCAACGATACGGTTCTTCATGTCATCGTTCCACAATCCCATTTCGACCAAATCCTT 741016 Query 22441 GACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTT 22500 || || || ||||||| ||||| ||||| || | ||| || || || |||||||| Sbjct 741017 GAGCAAATATGGGTTCACGACTTGGAACTCACCTGCCAAAACACGACGCGAATAAATGTT 741076 Query 22501 GGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGG 22560 || ||| | || ||||| ||||||| |||| ||||| | ||| ||||| || || Sbjct 741077 TGACGTGTAAGGCTCGAAGCATTCATTAAAGCCCAAAATCTGGGAGGTGGAAGCAGTGGG 741136 Query 22561 CATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCAT 22620 ||| || |||| || |||||||| | ||| || |||| | || |||||| | Sbjct 741137 CATTGGTGCCACAAGAAGCGAGTTGCGCAACCCATGCTCAGCCATCGACGACTTGAGGGT 741196 Query 22621 CGACCAGTCCCACAGATCGGACGGCGTCACA 22651 ||| ||||| ||||| || || || ||| Sbjct 741197 GTCCCAATCCCAAAGATCTGAAGGGGTAACA 741227 Score = 109 bits (120), Expect = 5e-19 Identities = 334/512 (65%), Gaps = 11/512 (2%) Strand=Plus/Minus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || | ||| || | ||||||||| ||||||| || || ||||| || || | Sbjct 1279621 TCATGAATAAATCTGGAACCCATAGAGCATAGAACAAGTCTCGTGCGCGGTATTCGTCCT 1279562 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 ||||| ||||||||| |||||||| ||| | | | |||||||||||| ||||| | Sbjct 1279561 TGCCGTGGTTCTTTTTTAAATCCAAGAAGGCAAGTATGTCCGCATGCCATGGCTCTAAAG 1279502 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 || | | || || |||||| ||| || |||||| | || | || |||| |||| Sbjct 1279501 TAATGCTTATGGCACCTGGTCTCCGATTACCTCCCTGACCCACAAATCGAGCCGCATTGT 1279442 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGG--ACGCGCCGCCTACGCCCGCCACACT 23589 || | | | ||| || || | ||| ||| || | | ||| || || || | Sbjct 1279441 TGAATGTGCGCAACATGGGAACAATACCACTGGCAACTCCTCCACTAGTCC--CCCCAAT 1279384 Query 23590 CGAA---CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 || | || || |||| || || || || || |||||||| | ||| || Sbjct 1279383 CGGAGTCCCGGCCGCGCGAATATTAGAGACATGCAAGCCAATGCCTCCCGCATGTTTAGA 1279324 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 || | ||||| | |||| |||||| | || || || |||||||| || | | || Sbjct 1279323 AATTTTGGCGCACAGCTTCAACGTGTCGAATATTCCTTCTATGCTGTCATCCATCATTGC 1279264 Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 || | ||||| || | |||||| | | | || ||| ||||| || || | Sbjct 1279263 AACTAGAAAACATGACGCCATTTGTGGTCTTACTGTCCCGGAATTGAACAAAGTGGGCGT 1279204 Query 23767 GGCGTGCGT--AAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATG 23824 || ||||| ||||| || | ||| | || || || |||||||| ||| | | Sbjct 1279203 TGCATGCGTAAAAAGTTTC--TGGCTCATCATATCATAGGTTTCGATGGCCCTATCGACG 1279146 Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCAT 23856 || || ||||| |||| |||||||||||| Sbjct 1279145 TCAGAACCATGTATTCCGACGGCGACGCGCAT 1279114 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 || || ||||| |||||||| ||||| || || ||||| || ||||| | || || ||| Sbjct 2696098 TCGAAGATGCAGATTTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAA 2696157 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306 || || | |||| | || || | || || ||||| || || | || || Sbjct 2696158 AGTTCGGATACGATCGATGCCGTTAAGAGCAAGATTGCCGACAAAGAGGGTATCCCTCCT 2696217 Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGC 31363 || |||||||| || || ||||| ||||| ||||||||||| | || | || | Sbjct 2696218 GATCAGCAGCGACTCATTTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACG-CTCT--CG 2696274 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || ||||| ||||| || || || ||||| || || ||| Sbjct 2696275 GACTACAACATCCAAAAGGAGTCTACACTTCACCTAGTGCTT 2696316 >seq3 Length=2099697 Score = 203 bits (224), Expect = 3e-47 Identities = 525/793 (66%), Gaps = 9/793 (1%) Strand=Plus/Plus Query 57503 GTCCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATA 57562 ||| || || || |||||| | ||||| || || | ||||| | ||||| || || Sbjct 1027321 GTCTGAAGAGCCTCTTTTGAAGGAGAACCCGGGTCGCTTTGTACTATTTCCTATCAGGTA 1027380 Query 57563 TCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGT 57622 | || |||||| | ||| || || || || || || || ||||| | |||||| | Sbjct 1027381 CCATGAAATTTGGCAGGCGTATAAGAAAGCGGAGGCCTCTTTCTGGACTGCCGAAGAGAT 1027440 Query 57623 AGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCA--AAGAATC-TGAGAGAAATTT 57679 || || ||||||| ||| || ||||| | || || || |||| || || Sbjct 1027441 TGATCTCGGTAAGGATTTGAATGACTGGGACAATCGCATGAACAAGGATGAGCGATTCTT 1027500 Query 57680 TATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGT 57739 ||| | || | || |||||||| || ||||| || ||||| |||||||| |||| Sbjct 1027501 CATTTCGAATGTACTCGCATTTTTCGCAGCCTCCGACGGCATTGTCAACGAGAACCTGGT 1027560 Query 57740 CGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGT 57799 || | || || ||||||||| | | ||||| | || ||||| ||||| ||| | Sbjct 1027561 TGAGCGGTTCTCTGGTGAAGTGCAAATCCCTGAGGCAAAGTGTTTTTATGGATTCCAAAT 1027620 Query 57800 GGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 || || || | || || || | || || || || || || || || | ||||| Sbjct 1027621 CATGATGGAGAATATTCACTCGGAGACTTACTCACTCCTGATTGACACATATATTAAGGA 1027680 Query 57860 CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAA 57919 | ||| || |||||||| || || || || || ||| || || || || Sbjct 1027681 TCCGAAAGAGGCACAGCACCTGTTCAATGCCATTGAGACCATTCCCTGCATTGCTAAAAA 1027740 Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978 ||| ||||| | | ||||| | | ||| | | |||| || || ||| | || Sbjct 1027741 GGCTAAGTGGGCGTTGCGCTGGATCAGTGATCGCGA-GTCCACATTTGCAGAGCGCCTTG 1027799 Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 | ||||| || || || || || || ||||| || ||| || || || || ||| Sbjct 1027800 TGGCGTTTGCTGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGC 1027859 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 | ||||| |||||||| ||||| || || || ||| || ||| | || || ||||| | Sbjct 1027860 TAAAGAAGCGCGGCCTCATGCCTGGTCTTACATTTTCTAATGAGCTAATTTCTCGCGATG 1027919 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 | ||| | |||||||||||||| ||||| ||| | | ||| ||| || ||| ||| Sbjct 1027920 AAGGTATGCATACTGATTTTGCTTGCCTCTTGTTCACGCACCTTGAAAACCGCCCGTCGC 1027979 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 | || |||| | |||||||| |||||||| | |||||| || || || |||| | Sbjct 1027980 GTGAGATCATCGAGCGGATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTG 1028039 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAA--CAATGATTTGATGTCAAAGTACATTGA 58276 | || || || || | | | || ||||| ||| | | |||| |||||||||| Sbjct 1028040 ATGCGCTCCCCGTATCTCTTTTGGGCATGAATGCAA--AGCTCATGTGCCAGTACATTGA 1028097 Query 58277 GTTTGTTGCCGAC 58289 ||| ||||||||| Sbjct 1028098 GTTCGTTGCCGAC 1028110 >seq2 Length=2224469 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || ||||| || || || |||| ||||| || Sbjct 961341 ATGCAGATTTTCGTGAAGACGCTAACGGGCAAGACCATTACGCTCGAGGTTGAGAGTTCG 961400 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || || || ||||| ||| | || || |||||| Sbjct 961401 GATACCATTGACGCTGTCAAGAGCAAGATTGCCGATAAGGAGGGCATCCCCCCTGACCAG 961460 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || || |||||||| ||| | || || | | | || | || || || Sbjct 961461 CAGCGTCTTATCTTTGCTGGCAAGCAGCTAGAGGA-TGGACGTACCCTCTCGGACTACAA 961519 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||||| || |||||||| || || || ||| Sbjct 961520 TATTCAAAAGGAGTCGACTCTACACCTTGTGCTT 961553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766377711680