Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 199 5e-46 >seq1 Length=3734243 Score = 199 bits (220), Expect = 5e-46 Identities = 1344/2144 (63%), Gaps = 63/2144 (3%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||| || || || ||||| || | | || || | || ||||| || ||||| ||| Sbjct 740691 GTGAACTGGATTGGCGCGGAAGCTGCCTGAGTGCGCAAGTAATACATACCGGTTTTGAGA 740750 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA-TCTGCTAT 64957 || | ||| || ||||| ||||| || || || ||| | ||| ||||| || Sbjct 740751 CCCTTAGACCAACCATAAAAGTGCATGCTGGTCAGCTTGCCCATTGTAGGACTCTGC-AT 740809 Query 64958 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 65017 | ||||| | |||||| ||||||||| || || | | ||||| ||||| | || Sbjct 740810 GTATATATTGAGAGATTGGGATTGATCGATAAACGCGGCACGATCTGCGGCCATGTCAAT 740869 Query 65018 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 65077 ||||| || || ||| ||||| | || || || | |||| | || || |||| Sbjct 740870 GATCGCTTTCTGGCTAATCTCCCAGACTGTCTTGTACAGCTGCTTCAGTTCATCAGGAA- 740928 Query 65078 GTTTG------TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 65131 ||| || |||||| ||||| || || | || | ||||| || ||||| Sbjct 740929 --TTGACGGGATAGACTGAATTGATCCTCCGCTAGCAACGATACGGTTCTTCATGTCATC 740986 Query 65132 ATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 65191 ||||| ||| | ||| ||| | | || | || || || || ||||| || || Sbjct 740987 GTTCCACAATCCCATTTCGACCAAATCCTTGAGCAAATATGGGTTCACGACTTGGAACTC 741046 Query 65192 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 65251 || | ||| || | || | ||||| || || || || || | | |||||| Sbjct 741047 ACCTGCCAAAACACGACGCGAATAAATGTTTGACGTGTAAGGCTCGAAGCATTCATTAAA 741106 Query 65252 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 65311 |||||||| || | || || ||||| ||||| |||||||| || || | | || Sbjct 741107 GCCCAAAATCTGGGAGGTGGAAGCAGTGGGCATTGGTGCCAC-AAGAAGCGAGTTGCGCA 741165 Query 65312 ACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGATCCGACGGTACA 65369 ||| ||| || | | | | |||| | |||||| ||||||||| || || | Sbjct 741166 ACCC-ATGCTCAGCCATCGACGACTTGAGGGTGTCCCAATCCCAAAGATCTGAAGGGGTA 741224 Query 65370 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTA--CGATCCTACATATGTAT 65427 || || || || | ||| | | |||||| ||| | | Sbjct 741225 ACACCCCAGAGGTCAAACTGCAGCTGGCCCT--CTGAAGCAGGCGATCCAGGATAAGACT 741282 Query 65428 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 65487 | || | || || | ||||||| || || || || | || ||| || || | Sbjct 741283 CATAGTGACCATCTCTAGCAGCTAGCTCTACGCTAGCTTCAATAGCGGCGTGGTATATTG 741342 Query 65488 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGA 65547 | || || || | |||| || || | || || ||||||| || || || || || Sbjct 741343 TCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGGCTATCGAACGGCAAACGTA-GA 741401 Query 65548 GAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 65606 | | | || | ||| || || ||||| ||||||| | | ||||| | ||| | | | || Sbjct 741402 GCAAAGAATGTGTCGGCCAAACCTTGGACACCAAGAGCAATAGGGCGATGGCGCATGTTT 741461 Query 65607 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 65666 ||| ||| || |||| ||| || || || | || ||||| ||||| || | Sbjct 741462 GAGCGACGAGCCTCAGGAACAGGGTAGTAGTTCTTCTCAATAATGCAGTTGAGGTTCCGA 741521 Query 65667 ACAATTACTTTGACCACATCCTTCAG-TTTGAGAA----------AATCAA--ATCGCTC 65713 || | || || ||||||| | || |||| ||| | || | ||||| | Sbjct 741522 ACTAGAACCTTAGCCACATCATGGAGCTTTGCGAAGTTATAGAGTACTCCACCATCGCGC 741581 Query 65714 ATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 65773 || | | || | || | || |||| || ||||| || || || | | Sbjct 741582 TGCTCGAGGTAGC-TGGGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTCTGG 741640 Query 65774 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 65833 || | | | ||||| ||||||||| || |||||| || || || || | Sbjct 741641 GCTCGAGAACTCGACAATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTT 741700 Query 65834 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 65893 ||| ||| ||| || |||||||| || || || | ||| |||| || ||| | Sbjct 741701 TTGGTTAGACTTACGATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGT 741760 Query 65894 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA----GATTTGTATC 65949 || | ||| | ||| || | ||| | | | ||||| || || || | || | Sbjct 741761 TTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTGCCTTGATGGTACGACGACCTTTACC 741820 Query 65950 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 66009 | ||||| | | | ||| |||| ||||| ||||| || | || | | | | Sbjct 741821 TAGCTTCTCGTACTT----TGTGTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTA 741876 Query 66010 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 66069 ||||||||||| |||||||| | | ||| ||||| || || || || || |||| Sbjct 741877 GACCAGGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCA 741936 Query 66070 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTC 66129 | || | ||| |||||||| ||||| | |||||||||| | | | ||||| |||| Sbjct 741937 TGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTC 741996 Query 66130 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATA 66189 | ||| || | ||| | ||| | | | |||| ||||||||| || || || | Sbjct 741997 CATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAA 742056 Query 66190 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 66249 | || | | | || || || || || || || ||||| | ||||| ||| || ||||| | Sbjct 742057 TTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGT 742116 Query 66250 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 66309 | || | |||||| || | |||||||||| ||||| || || || | ||||| | Sbjct 742117 ACACACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCAATATATGAGC 742176 Query 66310 CACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369 | | || ||||| || ||| ||||| || ||||| || |||||||| | | Sbjct 742177 CTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCG 742236 Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429 | || || |||||||| || || || || || ||||||| ||| | || | | Sbjct 742237 CACAAGTCTTCAACGTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGA 742296 Query 66430 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 66489 |||| ||||| || || || || |||||| | |||||||| ||||||| Sbjct 742297 AACATGAGGACATCTGCGCCTGAGGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCG 742356 Query 66490 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT-GA-GTCTAT-ATCCCATT 66546 | ||| || | | || | || ||||| | | || || | | | ||||| Sbjct 742357 TGAACATCTTCTGGCTCATAAGTTCATAAGTCTCCAAAACTCGAGGGATGTCATCCC--- 742413 Query 66547 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT-TGTTG 66605 ||| ||||| | | |||||||| | ||||||||| || | ||| || || | | Sbjct 742414 CATGGATTCCAATAGATACACGCATAATCATGTGCTGTGGGCGTTC-GTGAACTCTACCG 742472 Query 66606 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 66665 || | || | | ||| || || |||||||| || ||||| | ||||| ||| Sbjct 742473 TTCAGCTTGAGAAGGTATGACCGCTCTAAAGTTTTGAAGCCAAAGAAATTGTAATTGAAG 742532 Query 66666 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA---TATTTGTTAACTACATCC 66722 || || ||||||| || | ||||| | || ||| | | | || | ||||| | || Sbjct 742533 TCACGGTCGTAAACGATCGCAGAGTTCAATTCATCTTCATGCTGTTGGATAACTTC--CC 742590 Query 66723 ATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 66781 | | | ||| || || || || || ||||| | | | ||||| ||||| | | | Sbjct 742591 AAACT--TCCTTGGATATCATAGGTGAGTGTTTGTTAGTATGGGGATTAACATACTCGTA 742648 Query 66782 TAAAT--CCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 66839 || || | | | || | | ||| | || || || | ||| || | || || || Sbjct 742649 TAGATCGCGTGCTACAGTGGA--GAATTGCTTCTTAGTCTGTTTATGCAAGTTCGAAACA 742706 Query 66840 GCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 66899 || || | || |||| ||| |||||||| |||||| || || | ||| ||| | Sbjct 742707 GCAATACGGGCTGCTAGAATCGCATAATCTGGATGTACAGTCGTCATATAGGCGGCTGTC 742766 Query 66900 TCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 66943 || ||||| ||| |||| | ||| || || || ||||| || || Sbjct 742767 TCAGCTGCAAGATTGTCTAGTTCCACTGTAGTCACTCCGTTGTA 742810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172767091360