Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
>seq3
Length=2099697
Score = 107 bits (118), Expect = 2e-18
Identities = 383/591 (65%), Gaps = 11/591 (2%)
Strand=Plus/Minus
Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719
|| ||||||||| ||| | || ||||| | | ||| || || || |||||||| |
Sbjct 1027944 CAAGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGA 1027885
Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779
|| ||||| | || || || |||| ||| || || ||||| || || || |||||
Sbjct 1027884 CCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAG 1027825
Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839
|| |||||||| ||||||||||| | || || ||| |||| | || | | | |
Sbjct 1027824 ATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATG-TGGACTCGCGATCACT 1027766
Query 13840 -ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898
||||| ||||| | || ||||| ||| | || || || || |||||
Sbjct 1027765 GATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATT 1027706
Query 13899 GAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATAC 13956
||| | || | |||||| | | ||| ||| ||||| ||||| || | ||
Sbjct 1027705 GAACAGGTGCTGTGCCTCTTTCGGATCCTT--AATATATGTGTCAATCAGGAGTGAGTAA 1027648
Query 13957 ATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14016
| || ||||| || || || || || || || ||||||||||| | || || |
Sbjct 1027647 GTCTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCCTCAGGG 1027588
Query 14017 CATTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGC 14075
||| || || | || | || | || ||| ||| || || ||||| || || ||
Sbjct 1027587 ATTTGCACTTCACCAG-AGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGC 1027529
Query 14076 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT---TGAGTTTTTT 14132
||| |||||||| | || || ||| ||| || |||| || |||| || | || |
Sbjct 1027528 TGCGAAAAATGCGAGTACATTCGAAATGAAGAATCGCTCATCCTTGTTCATGCGATTGTC 1027469
Query 14133 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14192
||| || ||||||||| ||||| | || || | ||||| ||| || | ||
Sbjct 1027468 CCAGTCATTCAAATCCTTACCGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGC 1027409
Query 14193 TTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14243
||| |||||| ||| ||||| | || |||||||| | ||||||
Sbjct 1027408 TTTCTTATACGCCTGCCAAATTTCATGGTACCTGATAGGAAATAGTACAAA 1027358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588776070560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |