Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=2099697 Score = 107 bits (118), Expect = 2e-18 Identities = 383/591 (65%), Gaps = 11/591 (2%) Strand=Plus/Minus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || ||||||||| ||| | || ||||| | | ||| || || || |||||||| | Sbjct 1027944 CAAGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGA 1027885 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779 || ||||| | || || || |||| ||| || || ||||| || || || ||||| Sbjct 1027884 CCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAG 1027825 Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839 || |||||||| ||||||||||| | || || ||| |||| | || | | | | Sbjct 1027824 ATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATG-TGGACTCGCGATCACT 1027766 Query 13840 -ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898 ||||| ||||| | || ||||| ||| | || || || || ||||| Sbjct 1027765 GATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATT 1027706 Query 13899 GAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATAC 13956 ||| | || | |||||| | | ||| ||| ||||| ||||| || | || Sbjct 1027705 GAACAGGTGCTGTGCCTCTTTCGGATCCTT--AATATATGTGTCAATCAGGAGTGAGTAA 1027648 Query 13957 ATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14016 | || ||||| || || || || || || || ||||||||||| | || || | Sbjct 1027647 GTCTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCCTCAGGG 1027588 Query 14017 CATTGTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGC 14075 ||| || || | || | || | || ||| ||| || || ||||| || || || Sbjct 1027587 ATTTGCACTTCACCAG-AGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGC 1027529 Query 14076 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT---TGAGTTTTTT 14132 ||| |||||||| | || || ||| ||| || |||| || |||| || | || | Sbjct 1027528 TGCGAAAAATGCGAGTACATTCGAAATGAAGAATCGCTCATCCTTGTTCATGCGATTGTC 1027469 Query 14133 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14192 ||| || ||||||||| ||||| | || || | ||||| ||| || | || Sbjct 1027468 CCAGTCATTCAAATCCTTACCGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGC 1027409 Query 14193 TTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14243 ||| |||||| ||| ||||| | || |||||||| | |||||| Sbjct 1027408 TTTCTTATACGCCTGCCAAATTTCATGGTACCTGATAGGAAATAGTACAAA 1027358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588776070560