Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 208 1e-48 >seq1 Length=3734243 Score = 208 bits (230), Expect = 1e-48 Identities = 753/1162 (65%), Gaps = 32/1162 (3%) Strand=Plus/Plus Query 71760 GCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 71819 ||||||||| || |||||| || || || || | ||| ||| ||| || || Sbjct 741665 GCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACGATTGGCAGC 741724 Query 71820 ATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 71879 |||||| || || ||| ||||| |||| || ||| | || | ||| | ||| || | ||| Sbjct 741725 ATCCTTGTAGAGCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAATTGCGTACCA 741784 Query 71880 GACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCT--CTT-TCGTATTGTGTATA 71936 | | | ||||| || || | | || || || ||| ||||| | ||| || Sbjct 741785 CAGTTTTTGTGCCTTGATGGTA--CGACGACCT-TTACCTAGCTTCTCGTACTTTGTGTA 741841 Query 71937 TAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACAT 71996 | ||||| ||||| || | | | | ||| ||||||||||| | |||||||| Sbjct 741842 CAGCTCCTCGAATTCGTCACCATACACGTCGGCTAGACCAGGACATTCGCTTGGACACAT 741901 Query 71997 CAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 72056 | | ||| |||||||| || || || || ||||| || | ||| |||||||| ||||| Sbjct 741902 AAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAATCCATAGAGC 741961 Query 72057 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 72116 | |||| ||||| | | | |||||| ||||| ||| || | ||| | || Sbjct 741962 AAGGAATAAATCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCAAATCAATAAA 742021 Query 72117 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTT 72176 | | | | ||| ||||||||| || || || || || | | | ||||| || || || Sbjct 742022 CTCAAATACGTCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCGGGCGCTTATT 742081 Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 || || ||||| | ||||| ||| || ||||| || || | |||||| || | |||||| Sbjct 742082 GCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACACACGCAACATGGGCAAAATACC 742141 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 |||| | ||| || || || | ||||| || | || ||||| ||| ||| Sbjct 742142 ATTGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGTAGCGCGAATGTTGTGAATATT 742201 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 ||||| || ||||| || |||||||| | || || || |||||||| || || Sbjct 742202 GAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTCAACGTATCGTAAAT 742261 Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 72416 || || || ||||||| ||| | || | ||||| ||||| || || Sbjct 742262 CCCTTCAATTGAATCATCCTGCATTTGAACCAAGAAACATGAGGACATCTGCGCCTGAGG 742321 Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 || || |||||| | |||||||| |||||||| ||| || | || || | Sbjct 742322 CGTACCAGCATTATACAAGGTAGGGCTGGCGTGCGTGAACATCTTCTGGCTCATAAGTTC 742381 Query 72477 GTACGTCTCAATAGCT-----GAT-TCTATATCCCATTGATGTATTCCTACCGCGACACG 72530 || ||||| | | || ||| || ||||| ||| ||||| | | ||||| Sbjct 742382 ATAAGTCTCCAAAACTCGAGGGATGTC---ATCCC---CATGGATTCCAATAGATACACG 742435 Query 72531 CATTAACATATGCTGAGGTCTTTCAACGATCT-TGTTATTTATTTTCAACAAGTAGGATT 72589 ||| | ||| ||||| || | ||| || || | || | || | | ||| || Sbjct 742436 CATAATCATGTGCTGTGGGCGTTC-GTGAACTCTACCGTTCAGCTTGAGAAGGTATGACC 742494 Query 72590 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 72649 || |||||||| || ||||| | ||||| ||||| || ||||||| || | | Sbjct 742495 GCTCTAAAGTTTTGAAGCCAAAGAAATTGTAATTGAAGTCACGGTCGTAAACGATCGCAG 742554 Query 72650 AATTGAGTTTATCCTTA---TATTTGTTAACTATATCCATGGTGATACTT-GAAATAATC 72705 | || | || ||| | | | || | |||| | ||| | | ||| || || || Sbjct 742555 AGTTCAATTCATCTTCATGCTGTTGGATAAC--TTCCCAAACT--TCCTTGGATATCATA 742610 Query 72706 GGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAAT--CCTCCATCACTTCAC 72763 || || ||||| | | | ||||||||||| | | ||| || | | | || | | Sbjct 742611 GGTGAGTGTTTGTTAGTATGGGGATTAACATACTCGTATAGATCGCGTGCTACAGTGGA- 742669 Query 72764 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGG 72823 ||| | || || || | || || | || || || || || | ||| |||||||| | Sbjct 742670 -GAATTGCTTCTTAGTCTGTTTATGCAAGTTCGAAACAGCAATACGGGCTGCTAGAATCG 742728 Query 72824 CATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATT 72883 |||||||||||||| || || | ||| ||| | || ||||| ||| |||| | || Sbjct 742729 CATAATCTGGATGTACAGTCGTCATATAGGCGGCTGTCTCAGCTGCAAGATTGTCTAGTT 742788 Query 72884 CTACCGTTGTTACTCCATTATA 72905 | || || || ||||| || || Sbjct 742789 CCACTGTAGTCACTCCGTTGTA 742810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139166443040