Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3 223 5e-53
seq1 138 2e-27
>seq3
Length=2099697
Score = 223 bits (246), Expect = 5e-53
Identities = 580/870 (67%), Gaps = 27/870 (3%)
Strand=Plus/Plus
Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054
|| ||||| |||||||| ||||| |||||| | ||| || || || ||||||| ||
Sbjct 1027364 CTATTTCCTATCAGGTACCATGAAATTTGGCAGGCGTATAAGAAAGCGGAGGCCTCTTTC 1027423
Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114
||||| | ||||||| | ||||| ||||| || | || ||||| | ||| |||
Sbjct 1027424 TGGACTGCCGAAGAGATTGATCTCGGTAAGGATTTGAATGACTGGGACAATCGCATGAAC 1027483
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
| ||||||| || || ||| | | | || || || || | |||||| || ||
Sbjct 1027484 AAGGATGAGCGATTCTTCATTTCGAATGTACTCGCATTTTTCGCAGCCTCCGACGGCATT 1027543
Query 125175 GTCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233
|||||||| || ||| |||| || |||||| || || || || |||| |||
Sbjct 1027544 GTCAACGAGAACCTGGTTGAG-CGGTTCTCTGGTGAAGTGCAAATCCCTGAGGCAAAGTG 1027602
Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
||||| ||||||||||||||||| ||||| | |||||||| | ||||| |||||
Sbjct 1027603 TTTTTATGGATTCCAAATCATGATGGAGAATATTCACTCGGAGACTTACTCACTCCTGAT 1027662
Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGT 125353
||||| || ||| |||||| || ||| || || || || || || || |
Sbjct 1027663 TGACACATATATTAAGGATCCGAAAGAGGCACAGCACCTGTTCAATGCCATTGAGACCAT 1027722
Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTC 125413
|| | || |||||||||| | |||| | | || |||||| ||| | |||| |
Sbjct 1027723 TCCCTGCATTGCTAAAAAGGCTAAGTGGGCGTTGCGCTGGATCAGTGATCGCGAGTCCAC 1027782
Query 125414 GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT 125473
| || || | || ||||| || || || || ||||| |||||||| || || |||
Sbjct 1027783 ATTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTT 1027842
Query 125474 TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGA 125533
|| |||||| ||||| ||||||||||| |||||||| || || || ||| ||
Sbjct 1027843 CGCAAGCATCTTCTGGCTAAAGAAGCGCGGCCTCATGCCTGGTCTTACATTTTCTAATGA 1027902
Query 125534 GTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT 125592
| | || ||||| || || || | || ||| ||||| || |||| |||| ||
Sbjct 1027903 GCTAATTTCTCGCGATGAAGGTATGCATACTGATTTTGCTTGCCTCTTGTTCACGCACCT 1027962
Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAA---CATTGTAACCGATG 125649
|| || || || ||| || || ||||| | ||| | || || |
Sbjct 1027963 ---TGAAAACC----GCCCGTC--GCG-TG---AGATCATCGAGCGGATTATCACTGAGG 1028009
Query 125650 CCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGA 125709
| || ||| || | || || || || || | || || || | | |||||||
Sbjct 1028010 CGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCCGTATCTCTTTTGGGCATGA 1028069
Query 125710 ACTGC-AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG 125768
| ||| ||||| |||||| ||||||| ||||| || || || || || || || |
Sbjct 1028070 A-TGCAAAGCTCATGTGCCAGTACATTGAGTTCGTTGCCGACCG-CT--TGCTCGTGGCT 1028125
Query 125769 ATTGGC---CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA 125825
||||| | |||| | |||| || ||| ||||||||||||||| | || ||
Sbjct 1028126 CTTGGCCATCCCAAGGTGTACAGCGTTGCGAACCCCTTTGATTTCATGGAGAATATCTCG 1028185
Query 125826 CTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
|| | ||||||||||||||| || ||||||
Sbjct 1028186 CTTGCGGGTAAGACCAACTTCTTTGAGAAG 1028215
>seq1
Length=3734243
Score = 138 bits (152), Expect = 2e-27
Identities = 347/518 (67%), Gaps = 12/518 (2%)
Strand=Plus/Minus
Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACG 96865
||||||||| | | || ||| | |||| ||| | | |||||||| | | ||
Sbjct 742160 AACAAACGGTACCAGCAATGGTATTTTGCCCATGTTGCGTGTGTACAATAATACAGCTCG 742101
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| || ||||||||||| || || || ||| | || | || || || || ||
Sbjct 742100 ATACGTGGATCAAGGCGGCAATAAGCGCCCGGGTGCTTTCGCAATTTATTTAGAGCCGTG 742041
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
||| | ||||| ||||| ||||| || |||| ||||| ||| || ||| ||
Sbjct 742040 GCATGATGACGTATTTGAGTTTATTGATTTGCGGAAAAATCATGGAAAAGAGGAGATTCG 741981
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | || || || ||| || ||| | ||||||||||||||||||||||| || ||
Sbjct 741980 TGCGCGAGATTTATTCCTTGCTCTATGGATTCCAGATTTGTTCATGAAGCGCGTTAAAGA 741921
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCC---CGACTCGTCACCCGGTCTGTCCGATTGCTG 97102
| ||| | |||| || ||||| || ||| | || || ||||| |||| |
Sbjct 741920 GGATGGAGATTGGACTCTTATGTGTCCAAGCGAAT-GT--CCTGGTCTAGCCGACGTGTA 741864
Query 97103 GGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAG--AGGGCCGATACGTGAGA 97160
|| || || || |||| |||||| |||||| ||| ||| ||| |
Sbjct 741863 TGGTGACGAATTCGAGGAGCTGTACACAAAGTACGAG-AAGCTAGGTAAAGGTCGTCGTA 741805
Query 97161 CGAGTCGATGCACGAGAACTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAAC 97219
| | || | |||| | |||||||| | || | || ||| || || ||||| || |
Sbjct 741804 CCA-TCAAGGCACAAAAACTGTGGTACGCAATTCTTGA-AGCCCAAACTGAGACAGGTAA 741747
Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279
|||||| || |||||||||||| | | ||||| || |||||| ||||||| ||
Sbjct 741746 TCCGTATATGCTCTACAAGGATGCTGCCAATCGTAAGTCTAACCAAAAGAACTTGGGTAC 741687
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGT 97317
|||||| | |||||||| ||| || ||||| ||||
Sbjct 741686 AATCAAGAGTTCCAATCTTTGCTGCGAGATTGTCGAGT 741649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059162947040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |