Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 174 2e-38 >seq1 Length=3734243 Score = 174 bits (192), Expect = 2e-38 Identities = 1348/2160 (62%), Gaps = 63/2160 (3%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||| || || || ||||| || | | || || | || ||||| || ||||| ||| Sbjct 740691 GTGAACTGGATTGGCGCGGAAGCTGCCTGAGTGCGCAAGTAATACATACCGGTTTTGAGA 740750 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA-TCTGCTAT 62113 || | ||| || ||||| ||||| || || || ||| | ||| ||||| || Sbjct 740751 CCCTTAGACCAACCATAAAAGTGCATGCTGGTCAGCTTGCCCATTGTAGGACTCTGC-AT 740809 Query 62114 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62173 | ||||| | |||||| ||||||||| || || | | ||||| ||||| | || Sbjct 740810 GTATATATTGAGAGATTGGGATTGATCGATAAACGCGGCACGATCTGCGGCCATGTCAAT 740869 Query 62174 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62233 ||||| || || ||| ||||| | || || || | |||| | || || |||| Sbjct 740870 GATCGCTTTCTGGCTAATCTCCCAGACTGTCTTGTACAGCTGCTTCAGTTCATCAGGAA- 740928 Query 62234 GTTTG------TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 62287 ||| || |||||| ||||| || || | || | ||||| || ||||| Sbjct 740929 --TTGACGGGATAGACTGAATTGATCCTCCGCTAGCAACGATACGGTTCTTCATGTCATC 740986 Query 62288 ATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62347 ||||| ||| | ||| ||| | | || | || || || || ||||| || || Sbjct 740987 GTTCCACAATCCCATTTCGACCAAATCCTTGAGCAAATATGGGTTCACGACTTGGAACTC 741046 Query 62348 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62407 || | ||| || | || | ||||| || || || || || | | |||||| Sbjct 741047 ACCTGCCAAAACACGACGCGAATAAATGTTTGACGTGTAAGGCTCGAAGCATTCATTAAA 741106 Query 62408 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62467 |||||||| || | || || ||||| ||||| |||||||| || || | | || Sbjct 741107 GCCCAAAATCTGGGAGGTGGAAGCAGTGGGCATTGGTGCCAC-AAGAAGCGAGTTGCGCA 741165 Query 62468 ACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGATCCGACGGTACA 62525 ||| ||| || | | | | |||| | |||||| ||||||||| || || | Sbjct 741166 ACCC-ATGCTCAGCCATCGACGACTTGAGGGTGTCCCAATCCCAAAGATCTGAAGGGGTA 741224 Query 62526 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTA--CGATCCTACATATGTAT 62583 || || || || | ||| | | |||||| ||| | | Sbjct 741225 ACACCCCAGAGGTCAAACTGCAGCTGGCCCT--CTGAAGCAGGCGATCCAGGATAAGACT 741282 Query 62584 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62643 | || | || || | ||||||| || || || || | || ||| || || | Sbjct 741283 CATAGTGACCATCTCTAGCAGCTAGCTCTACGCTAGCTTCAATAGCGGCGTGGTATATTG 741342 Query 62644 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGA 62703 | || || || | |||| || || | || || ||||||| || || || || || Sbjct 741343 TCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGGCTATCGAACGGCAAACGTA-GA 741401 Query 62704 GAATA-AACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762 | | | || | ||| || || ||||| ||||||| | | ||||| | ||| | | | || Sbjct 741402 GCAAAGAATGTGTCGGCCAAACCTTGGACACCAAGAGCAATAGGGCGATGGCGCATGTTT 741461 Query 62763 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62822 ||| ||| || |||| ||| || || || | || ||||| ||||| || | Sbjct 741462 GAGCGACGAGCCTCAGGAACAGGGTAGTAGTTCTTCTCAATAATGCAGTTGAGGTTCCGA 741521 Query 62823 ACAATTACTTTGACCACATCCTTCAG-TTTGAGAA----------AATCAA--ATCGCCC 62869 || | || || ||||||| | || |||| ||| | || | ||||| | Sbjct 741522 ACTAGAACCTTAGCCACATCATGGAGCTTTGCGAAGTTATAGAGTACTCCACCATCGCGC 741581 Query 62870 ATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 62929 || | | || | || | || |||| || ||||| || || || | | Sbjct 741582 TGCTCGAGGTAGC-TGGGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTCTGG 741640 Query 62930 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 62989 || | | | ||||| ||||||||| || |||||| || || || || | Sbjct 741641 GCTCGAGAACTCGACAATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTT 741700 Query 62990 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63049 ||| ||| ||| || |||||||| || || || | ||| |||| || ||| | Sbjct 741701 TTGGTTAGACTTACGATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGT 741760 Query 63050 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA----GATTTGTATC 63105 || | ||| | ||| || | ||| | | | ||||| || || || | || | Sbjct 741761 TTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTGCCTTGATGGTACGACGACCTTTACC 741820 Query 63106 TCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63165 | ||||| | | | ||| |||| ||||| ||||| || | || | | | | Sbjct 741821 TAGCTTCTCGTACTT----TGTGTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTA 741876 Query 63166 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63225 ||||||||||| |||||||| | | ||| ||||| || || || || || |||| Sbjct 741877 GACCAGGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCA 741936 Query 63226 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63285 | || | ||| |||||||| ||||| | |||| ||||| | | | ||||| |||| Sbjct 741937 TGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTC 741996 Query 63286 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63345 | ||| || | ||| | ||| | | | ||| ||||||||| || || || | Sbjct 741997 CATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAA 742056 Query 63346 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63405 | || | | | || || || || || || || ||||| | ||||| ||| || ||||| | Sbjct 742057 TTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGT 742116 Query 63406 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTC 63465 | || | |||||| || | |||||| || |||| || || || | ||||| | Sbjct 742117 ACACACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCAATATATGAGC 742176 Query 63466 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 | | || ||||| || ||| ||||| || ||||| || |||||||| | | Sbjct 742177 CTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCG 742236 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 | || || ||||| || || || || || || |||||| ||| | || | | Sbjct 742237 CACAAGTCTTCAACGTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGA 742296 Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645 |||| ||||| || || || || |||||| | |||||||| ||||||| Sbjct 742297 AACATGAGGACATCTGCGCCTGAGGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCG 742356 Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT-GA-GTCTAT-ATCCCATT 63702 | ||| || | | || | || ||||| | | || || | | | ||||| Sbjct 742357 TGAACATCTTCTGGCTCATAAGTTCATAAGTCTCCAAAACTCGAGGGATGTCATCCC--- 742413 Query 63703 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT-TGTTG 63761 ||| ||||| | | |||||||| | ||||||||| || | ||| || || | | Sbjct 742414 CATGGATTCCAATAGATACACGCATAATCATGTGCTGTGGGCGTTC-GTGAACTCTACCG 742472 Query 63762 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63821 || | || | | ||| || || |||||||| || ||||| | ||||| ||| Sbjct 742473 TTCAGCTTGAGAAGGTATGACCGCTCTAAAGTTTTGAAGCCAAAGAAATTGTAATTGAAG 742532 Query 63822 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA---TATTTGTTAACTATATCC 63878 || || ||||||| || | ||||| | || ||| | | | || | |||| | || Sbjct 742533 TCACGGTCGTAAACGATCGCAGAGTTCAATTCATCTTCATGCTGTTGGATAAC--TTCCC 742590 Query 63879 ATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63937 | | | ||| || || || || || ||||| | | | ||||||||||| | | | Sbjct 742591 AAACT--TCCTTGGATATCATAGGTGAGTGTTTGTTAGTATGGGGATTAACATACTCGTA 742648 Query 63938 TAAAT--CCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACG 63995 || || | | | || | | ||| | || || || | || || | || || || Sbjct 742649 TAGATCGCGTGCTACAGTGGA--GAATTGCTTCTTAGTCTGTTTATGCAAGTTCGAAACA 742706 Query 63996 GCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 64055 || || | ||| |||||||| |||||||| |||||| || || | ||| ||| | Sbjct 742707 GCAATACGGGCTGCTAGAATCGCATAATCTGGATGTACAGTCGTCATATAGGCGGCTGTC 742766 Query 64056 TCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACC 64115 || ||||| ||| |||| | ||| || || || ||||| || || | ||| ||| ||| Sbjct 742767 TCAGCTGCAAGATTGTCTAGTTCCACTGTAGTCACTCCGTTGTAGACACCTGAAATGACC 742826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947168852640