Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 224 3e-53 >seq1 Length=3734243 Score = 224 bits (248), Expect = 3e-53 Identities = 586/875 (67%), Gaps = 24/875 (3%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 |||||||| ||||| ||| | |||||||| ||||||| |||||| | ||||| || Sbjct 742459 GAACGCCCACAGCACATGATTATGCGTGTATCTATTGGAATCCATGG---GGATGAC-AT 742404 Query 363508 GCCGCGATT----GAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCC 363563 || ||| | || || ||| | ||| | || | ||||||||||||| || Sbjct 742403 CCCTCGAGTTTTGGAGACTTATGAACTTATGAGCCAGAAGATGTTCACGCACGCCAGCCC 742344 Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAA 363622 || |||| |||||||| || | | | | |||||||| || || |||||| | ||| Sbjct 742343 TACCTTGTATAATGCTGGTACGCCTCAGGCGCAGATGTCCTCATG-TTTCTTGGTTCAAA 742285 Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682 || |||| ||||| || || || || | || || | |||| |||||| || || || | Sbjct 742284 TGCAGGATGATTCAATTGAAGGGATTTACGATACGTTGAAGACTTGTGCGCTCATCTCTA 742225 Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATT 363741 || ||| || || |||||| | || ||||| |||| || |||| | || ||| Sbjct 742224 AGTCTGCTGGGGGTATTGGTCTCAATATTCACAACATTCGCGCTACAGG-CTCATATATT 742166 Query 363742 CGCGGCACAGGGGGATACTCG-AATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 || ||| || ||| | ||||| | | |||||| | ||||||| | ||||| Sbjct 742165 GCTGGAACAAACGG-TACCAGCAATGGTATTTTGCCCATGTTGCGTGTGTACAATAATAC 742107 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 || | ||||| || || || || |||||| || || || || || ||| | || Sbjct 742106 AGCTCGATACGTGGATCAAGGCGGCAATAAGCGCCCGGGTGCTTTCGCAATTTATTTAGA 742047 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| |||| || | ||||||||| |||| | |||||||| ||||||||||| Sbjct 742046 GCCGTGGCATGATGACGTATTTGAGTTTATTGATTTGCGGAAAAATCATGGAAAAGAGGA 741987 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | ||||| || ||| | ||| ||| || ||| || | || || ||||||||||| Sbjct 741986 GATTCGTGCGCGAGATTTATTCCTTGCTCTATGGATTCCAGATTTGTTCATGAAGCGCGT 741927 Query 363981 GGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 | | ||| || ||||| | || | || ||| ||||||||| ||||| |||| | Sbjct 741926 TAAAG-AGGATGGAGATTGGACTCTTATGTGTCCAAGCGAATGTCCTGGTCTAGCCGACG 741868 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA-ATCGGAGGGAAAGGCTCGT 364098 | | |||||||| | | | || ||| |||||| || | ||| ||||| |||| Sbjct 741867 TGTATGGTGACGAATTCGAGGAGCTGTACACAAAGTACGAGAAGCTAGGTAAAGG-TCGT 741809 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 || || ||||| || || |||| || || | || | || | ||||||||| Sbjct 741808 CGTACCATCAAGGCACAAAAACTGTGGTACGCAATTCTTGAAGCCCAAACTGAGACAGGT 741749 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 | || |||||| | ||||| ||| | ||| || ||||| ||||| || || | ||| Sbjct 741748 AATCCGTATATGCTCTACAAGGATGCTGCCAATCGTAAGTCTAACCAAAAGAACTTGGGT 741689 Query 364219 ACAATTCAGCAGAG---CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 |||| ||| |||| ||| || || ||||||| | || | | | || ||||| Sbjct 741688 ACAA-TCA--AGAGTTCCAATCTTTGCTGCGAGATTGTCGAGTTCTCGAGCCCAGACGAA 741632 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCC 364310 ||| || || ||| | || || ||||| ||||| Sbjct 741631 GTTGCTGTTTGCAACTTGGCCTCAATCGCTCTTCC 741597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353533203128