Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 125 7e-24 seq1 89.7 5e-13 >seq2 Length=2224469 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | |||| ||||||||||||||||| ||||| || Sbjct 961567 CCACCACGGAGGCGAAGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAG 961508 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||||||||||||||| || |||| | |||||||||||| || ||| Sbjct 961507 AGGGTACGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGG 961448 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC-TCCACAGTATCGGTGGACTCGAT 131186 || || || || |||| || || ||||| | || || | ||||| | ||| | Sbjct 961447 ATGCCCTCCTTATCGGCAATCTTGCTCTTGA-CAGCGTCAATGGTATCCGAACTCTCAAC 961389 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || ||||| || || |||||||||||||| Sbjct 961388 CTCGAGCGTAATGGTCTTGCCCGTTAGCGTCTTCACGAAAATCTGCAT 961341 >seq1 Length=3734243 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||||| || | || ||||||||||| |||||||| || Sbjct 2696330 CCACCACGAAGGCGAAGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAG 2696271 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | ||||||||| ||| | || | |||||||| || |||||| Sbjct 2696270 AGCGTACGGCCATCTTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGG 2696211 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC-TCCACAGTATCGGTGGACTCGAT 131186 || || |||||||||| || || ||| | | || || | ||||| | |||| Sbjct 2696210 ATACCCTCTTTGTCGGCAATCTTGCTCTT-AACGGCATCGATCGTATCCGAACTTTCGAC 2696152 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || |||||||||||||| Sbjct 2696151 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCAT 2696104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012776399360