Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 7e-24
seq1 89.7 5e-13
>seq2
Length=2224469
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| | |||| ||||||||||||||||| ||||| ||
Sbjct 961567 CCACCACGGAGGCGAAGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAG 961508
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||||||||||||||| || |||| | |||||||||||| || |||
Sbjct 961507 AGGGTACGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGG 961448
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC-TCCACAGTATCGGTGGACTCGAT 131186
|| || || || |||| || || ||||| | || || | ||||| | ||| |
Sbjct 961447 ATGCCCTCCTTATCGGCAATCTTGCTCTTGA-CAGCGTCAATGGTATCCGAACTCTCAAC 961389
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| ||| || || ||||| || || ||||||||||||||
Sbjct 961388 CTCGAGCGTAATGGTCTTGCCCGTTAGCGTCTTCACGAAAATCTGCAT 961341
>seq1
Length=3734243
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||||| || | || ||||||||||| |||||||| ||
Sbjct 2696330 CCACCACGAAGGCGAAGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAG 2696271
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || | ||||||||| ||| | || | |||||||| || ||||||
Sbjct 2696270 AGCGTACGGCCATCTTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGG 2696211
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC-TCCACAGTATCGGTGGACTCGAT 131186
|| || |||||||||| || || ||| | | || || | ||||| | ||||
Sbjct 2696210 ATACCCTCTTTGTCGGCAATCTTGCTCTT-AACGGCATCGATCGTATCCGAACTTTCGAC 2696152
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || ||||||||||||||
Sbjct 2696151 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCAT 2696104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012776399360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |