Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 190 3e-43 >seq1 Length=3734243 Score = 190 bits (210), Expect = 3e-43 Identities = 1342/2144 (63%), Gaps = 63/2144 (3%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||| || || || ||||| || | | || || | || ||||| || ||||| ||| Sbjct 740691 GTGAACTGGATTGGCGCGGAAGCTGCCTGAGTGCGCAAGTAATACATACCGGTTTTGAGA 740750 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA-TCTGCTAT 61968 || | ||| || ||||| ||||| || || || ||| | ||| ||||| || Sbjct 740751 CCCTTAGACCAACCATAAAAGTGCATGCTGGTCAGCTTGCCCATTGTAGGACTCTGC-AT 740809 Query 61969 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62028 | ||||| | |||||| ||||||||| || || | | ||||| ||||| | || Sbjct 740810 GTATATATTGAGAGATTGGGATTGATCGATAAACGCGGCACGATCTGCGGCCATGTCAAT 740869 Query 62029 AATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62088 |||| || || ||| ||||| | || || || | |||| | || || |||| Sbjct 740870 GATCGCTTTCTGGCTAATCTCCCAGACTGTCTTGTACAGCTGCTTCAGTTCATCAGGAA- 740928 Query 62089 GTTTG------TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATC 62142 ||| || |||||| ||||| || || | || | ||||| || ||||| Sbjct 740929 --TTGACGGGATAGACTGAATTGATCCTCCGCTAGCAACGATACGGTTCTTCATGTCATC 740986 Query 62143 ATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62202 ||||| ||| | ||| ||| | | || | || || || || ||||| || || Sbjct 740987 GTTCCACAATCCCATTTCGACCAAATCCTTGAGCAAATATGGGTTCACGACTTGGAACTC 741046 Query 62203 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 62262 || | ||| || | || | ||||| || || || || || | | |||||| Sbjct 741047 ACCTGCCAAAACACGACGCGAATAAATGTTTGACGTGTAAGGCTCGAAGCATTCATTAAA 741106 Query 62263 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62322 |||||||| || | || || ||||| ||||| |||||||| || || | | || Sbjct 741107 GCCCAAAATCTGGGAGGTGGAAGCAGTGGGCATTGGTGCCAC-AAGAAGCGAGTTGCGCA 741165 Query 62323 ACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGATCCGACGGTACA 62380 ||| ||| || | | | | |||| | |||||| ||||||||| || || | Sbjct 741166 ACCC-ATGCTCAGCCATCGACGACTTGAGGGTGTCCCAATCCCAAAGATCTGAAGGGGTA 741224 Query 62381 ACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTA--CGATCCTACATATGTAT 62438 || || || || | ||| | | |||||| ||| | | Sbjct 741225 ACACCCCAGAGGTCAAACTGCAGCTGGCCCT--CTGAAGCAGGCGATCCAGGATAAGACT 741282 Query 62439 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62498 | || | || || | ||||||| || || || || | || ||| || || | Sbjct 741283 CATAGTGACCATCTCTAGCAGCTAGCTCTACGCTAGCTTCAATAGCGGCGTGGTATATTG 741342 Query 62499 TTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGA 62558 | || || || | |||| || || |||| || ||||||| || || || || || Sbjct 741343 TCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGGCTATCGAACGGCAAACGTA-GA 741401 Query 62559 GAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62617 | | | || | ||| || || ||||| ||||||| | | ||||| | ||| | | | || Sbjct 741402 GCAAAGAATGTGTCGGCCAAACCTTGGACACCAAGAGCAATAGGGCGATGGCGCATGTTT 741461 Query 62618 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62677 ||| ||| || |||| ||| || || || | || ||||| ||||| || | Sbjct 741462 GAGCGACGAGCCTCAGGAACAGGGTAGTAGTTCTTCTCAATAATGCAGTTGAGGTTCCGA 741521 Query 62678 ACAATTACTTTGACCACATCCTTCAG-TTTGAGAA----------AATCAA--ATCGCCC 62724 || | || || ||||||| | || |||| ||| | || | ||||| | Sbjct 741522 ACTAGAACCTTAGCCACATCATGGAGCTTTGCGAAGTTATAGAGTACTCCACCATCGCGC 741581 Query 62725 ATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 62784 || | | || | || | || |||| || ||||| || || || | | Sbjct 741582 TGCTCGAGGTAGC-TGGGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTCTGG 741640 Query 62785 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 62844 || | | | ||||| ||||||||| || |||||| || || || || | Sbjct 741641 GCTCGAGAACTCGACAATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTT 741700 Query 62845 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 62904 ||| ||| ||| || |||||||| || || || | ||| |||| || ||| | Sbjct 741701 TTGGTTAGACTTACGATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGT 741760 Query 62905 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA----GATTTGTATC 62960 || | ||| | ||| || | ||| | | | ||||| || || || | || | Sbjct 741761 TTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTGCCTTGATGGTACGACGACCTTTACC 741820 Query 62961 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63020 | ||||| | | | ||| |||| ||||| ||||| || | || | | | | Sbjct 741821 TAGCTTCTCGTACTT----TGTGTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTA 741876 Query 63021 GTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63080 | ||||||||||| |||||||| | | ||| ||||| || || || || || |||| Sbjct 741877 GACCAGGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCA 741936 Query 63081 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63140 | || | ||| |||||||| ||||| | |||| ||||| | | | ||||| |||| Sbjct 741937 TGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTC 741996 Query 63141 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63200 | ||| || | ||| | ||| | | | ||| ||||||||| || || || | Sbjct 741997 CATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAA 742056 Query 63201 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63260 | || | | | || || || || || || || ||||| | ||||| ||| || ||||| | Sbjct 742057 TTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGT 742116 Query 63261 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTC 63320 | || | |||||| || | |||||||||| ||||| || || || | ||||| | Sbjct 742117 ACACACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCAATATATGAGC 742176 Query 63321 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63380 | | || ||||| || ||| ||||| || ||||| || |||||||| | | Sbjct 742177 CTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCG 742236 Query 63381 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 63440 | || || |||||||| || || || || || ||||||| ||| | || | | Sbjct 742237 CACAAGTCTTCAACGTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGA 742296 Query 63441 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAG 63500 |||| ||||| || || || || |||||| | |||||||| ||||| | Sbjct 742297 AACATGAGGACATCTGCGCCTGAGGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCG 742356 Query 63501 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT-GA-GTCTAT-ATCCCATT 63557 | ||| || | | || | || ||||| | | || || | | | ||||| Sbjct 742357 TGAACATCTTCTGGCTCATAAGTTCATAAGTCTCCAAAACTCGAGGGATGTCATCCC--- 742413 Query 63558 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT-TGTTG 63616 ||| ||||| | | |||||||| | ||||||||| || | ||| || || | | Sbjct 742414 CATGGATTCCAATAGATACACGCATAATCATGTGCTGTGGGCGTTC-GTGAACTCTACCG 742472 Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676 || | || | | ||| || || |||||||| || ||||| | ||||| ||| Sbjct 742473 TTCAGCTTGAGAAGGTATGACCGCTCTAAAGTTTTGAAGCCAAAGAAATTGTAATTGAAG 742532 Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTA---TATTTGTTAACTACATCC 63733 || || ||||||| || | ||||| | || ||| | | | || | ||||| | || Sbjct 742533 TCACGGTCGTAAACGATCGCAGAGTTCAATTCATCTTCATGCTGTTGGATAACTTC--CC 742590 Query 63734 ATGGTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 63792 | | | ||| || || ||||| | ||||| | | | ||||| ||||| | | | Sbjct 742591 AAACT--TCCTTGGATATCATAGGTGAGTGTTTGTTAGTATGGGGATTAACATACTCGTA 742648 Query 63793 TAAAT--CCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 63850 || || | | | || | | ||| | || || || | ||| || | || || || Sbjct 742649 TAGATCGCGTGCTACAGTGGA--GAATTGCTTCTTAGTCTGTTTATGCAAGTTCGAAACA 742706 Query 63851 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATT 63910 || || | || |||||||| |||||||| |||||| || || | ||| ||| | Sbjct 742707 GCAATACGGGCTGCTAGAATCGCATAATCTGGATGTACAGTCGTCATATAGGCGGCTGTC 742766 Query 63911 TCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 || ||||| ||| |||| | ||| || || || || || || || Sbjct 742767 TCAGCTGCAAGATTGTCTAGTTCCACTGTAGTCACTCCGTTGTA 742810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631968318400