Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 165 9e-36 >seq3 Length=2099697 Score = 165 bits (182), Expect = 9e-36 Identities = 411/622 (66%), Gaps = 9/622 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||| || ||||| | |||||| || || || || | |||||| ||||| | Sbjct 1027945 GCAAGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAG 1027886 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||| ||||| || || || ||| || || || || Sbjct 1027885 ACCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAA 1027826 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG---CGGAATTACT 93267 || || || || || ||||| ||||||| || || ||||| | | || || ||| Sbjct 1027825 GATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCGCGATCACT 1027766 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | ||||| || ||||| | || ||||| ||| || || | || || || || Sbjct 1027765 G---ATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGC 1027709 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || |||| | | ||| | || ||| || ||||| || || | || || || Sbjct 1027708 ATTGAACAGGTGCTGTGCCTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGTGAGTA 1027649 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || || || | ||||||||| ||||||||||| || ||||| | || || | Sbjct 1027648 AGTCTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCCTCAGG 1027589 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||| |||||||| ||| || | ||| || || || || ||||| || || ||||| || Sbjct 1027588 GATTTGCACTTCACCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGC 1027529 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564 ||| ||||| || | || || | || || | |||||| | || | | || || Sbjct 1027528 TGCGAAAAATGCGAGTACATTCGAAATGAAGAATCGCTCATCCTTGTTCATGCGATTGTC 1027469 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| || | ||| || ||||| | |||||| ||||||| || || || || || Sbjct 1027468 CCAGTCATTCAAATCCTTACCGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGC 1027409 Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGG 93684 ||| || ||| | ||| || || || || || ||||||| ||||| ||| || Sbjct 1027408 TTTCTTATACGCCTGCCAAATTTCATGGTACCTGATAGGAAATAGTACAAAGCGACCCGG 1027349 Query 93685 GTTATCTTTTAGTAACGGCTCT 93706 ||| || || | | |||||| Sbjct 1027348 GTTCTCCTTCAAAAGAGGCTCT 1027327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860772156960