Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 228 2e-54 seq1 98.7 2e-15 >seq3 Length=2099697 Score = 228 bits (252), Expect = 2e-54 Identities = 564/843 (67%), Gaps = 16/843 (2%) Strand=Plus/Plus Query 42311 GTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGACAC 42370 ||| ||||| ||| || ||| |||||| ||||| |||||||| || | ||||| Sbjct 1027399 GTATAAGAAAGCGGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTCGGTAAGGATTT 1027458 Query 42371 GGCCGGCTGGGAGTCACTGTC-TGAG-AACGAAAAGTTTTTCCTCAAA---AACATACTG 42425 | | |||||| || | | ||| || || || ||| ||| || |||| Sbjct 1027459 GAATGACTGGGA--CAATCGCATGAACAAGGATGAGCGATTCTTCATTTCGAATGTACTC 1027516 Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 || || ||||| ||||| |||||||| ||||| |||||||||| ||||| Sbjct 1027517 GCATTTTTCGCAGCCTCCGACGGCATTGTCAACGAGAACCTGGTTGAGCGGTTCTCTGGT 1027576 Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545 || ||||| | |||||| || || || || ||||| || || ||||| | Sbjct 1027577 GAAGTGCAAATCCCTGAGGCAAAGTGTTTTTATGGATTCCAAATCATGATGGAGAATATT 1027636 Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605 ||||| ||| ||| | ||| | |||| || || |||||| ||| | Sbjct 1027637 CACTCGGAGACTTACTCACTCCTGATTGACACATATATTAAGGATCCGAAAGAGGCACAG 1027696 Query 42606 GGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTC 42665 |||||||| ||||| ||||| || |||||||| || ||||| | |||||| | Sbjct 1027697 CACCTGTTCAATGCCATTGAGACCATTCCCTGCATTGCTAAAAAGGCTAAGTGGGCGTTG 1027756 Query 42666 AACTGGATCGAGAG-TCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGT 42724 ||||||| || | || ||| | || || | ||| | || || || ||| | || || Sbjct 1027757 CGCTGGATC-AGTGATCGCGAGTCCACATTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGT 1027815 Query 42725 CGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGT 42783 ||||| ||||||||||| ||| | ||||| |||||||||||| ||| || || | Sbjct 1027816 TGAGGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGCTAAAGAAGCGCGGCCT 1027875 Query 42784 CGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGG 42843 | ||||| || || || || || || || || || | || || || |||||| | Sbjct 1027876 C-ATGCCTGGTCTTACATTTTCTAATGAGCTAATTTCTCGCGATGAAGGTATGCATACTG 1027934 Query 42844 ACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCC 42903 | ||||| |||||| ||||| || ||||| || || ||| ||| || Sbjct 1027935 ATTTTGCTTGCCTCTTGTTCACG---CACCTTGAAAACCGCCCGTCGCGTGAGATCATCG 1027991 Query 42904 GGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCG 42963 | || ||||| ||||| || |||||||||||||| |||||||| | |||| |||| Sbjct 1027992 AGCGGATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCCG 1028051 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 | || || | |||||||| | ||||||||| ||||||| ||| ||| ||||||| Sbjct 1028052 TATCTCTTTTGGGCATGAATGCAAAGCTCATGTGCCAGTACATTGAGTTCGTTGCCGACC 1028111 Query 43024 ATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTT 43082 | || ||| | ||| || | | |||| | || |||||| || || Sbjct 1028112 GCTTGCTCGTGGCTCTTGGCCATC-CCAAGGTGTACAGCGTTGCGAACCCCTTTGATTTC 1028170 Query 43083 ATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142 |||||||| |||||| | | ||| ||||||||||| || |||||||| ||| | |||||| Sbjct 1028171 ATGGAGAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAGAAGCGAGTCTCGGACTAC 1028230 Query 43143 CAG 43145 ||| Sbjct 1028231 CAG 1028233 >seq1 Length=3734243 Score = 98.7 bits (108), Expect = 2e-15 Identities = 319/489 (65%), Gaps = 6/489 (1%) Strand=Plus/Plus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 ||||| |||||| || || || || || | | | | | ||| |||||||||| ||| || Sbjct 741611 GGCCAAGTTGCAAACAGCAACTTCGTCTGGGCTCGAGAACTCGACAATCTCGCAGCAAAG 741670 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 || | |||||| || |||| || || || || ||||| ||| || ||||| Sbjct 741671 ATTGGAACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACGATTGGCAGCATCCTT 741730 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||||||||| | || || ||||| ||||| | || | || ||| || | Sbjct 741731 GTAGAGCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAATTGCGTACCACAGTTT 741790 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCT--CTGCCTCGTAGCGGGTGTACAGGGCC 244924 ||||||| || | ||| |||| ||| || |||||| |||||||| || Sbjct 741791 TTGTGCCTTGATGGTACGACGA-CCTTTACCTAGCT-TCTCGTACTTTGTGTACAGCTCC 741848 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGC-CGGGCACATGAGACT 244983 ||||| ||| || | || ||| |||| || || || ||| || ||||| ||| | Sbjct 741849 TCGAATTCGTCACCATACACGTCGGCTAGACCAGGACA-TTCGCTTGGACACATAAGAGT 741907 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || || | || || || | || |||||| | || || ||||| || || |||| Sbjct 741908 CCAATCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAATCCATAGAGCAAGGAA 741967 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 | || | | | ||| || ||| || |||| || || | ||| ||||| Sbjct 741968 TAAATCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCAAATCAATAAACTCAAA 742027 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 ||||| | ||||| ||||| | || | |||| || || || ||||| ||||| || Sbjct 742028 TACGTCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCC 742087 Query 245164 CTGGTCCAC 245172 || ||||| Sbjct 742088 TTGATCCAC 742096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339152783040