Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 >seq3 Length=2099697 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 334134 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 334193 || |||| |||||| || |||||| | || || | ||||| || ||||| |||||| Sbjct 1705000 CCATCGATATCGTGCTCGACGTAAACGGTCTTTAGCTCATCCTGCGACGGGAAGCCTTCA 1705059 Query 334194 AGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACAC 334253 | ||| || | ||||||| ||||| || || || ||||| || || || || ||||| Sbjct 1705060 ACCTGGCCCTCAGCAATAGCACGCATAAGCGTCGACTTACCAGCACCATTAGGACCACAG 1705119 Query 334254 AGACCGTA---GCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTT 334310 |||||||| ||||||| ||| ||| | | | ||| ||| || ||||| || Sbjct 1705120 AGACCGTAGCGGCGGTTT---TTCTTTAGACGCAGCTGAGTACGGTTGAGTAGAATCTTA 1705176 Query 334311 CCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||| || || ||||| || ||| | || ||||| ||||| Sbjct 1705177 GCACCGTAGGCAAGAGAGAACTCAGTGTTGCAGAGATCTTCACC 1705220 Score = 95.1 bits (104), Expect = 3e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 || ||||| || || ||||| | ||| ||||||||| | || || | || Sbjct 1027997 ATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCCGTATCT 1028056 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | |||||||| | | |||||| | |||||||| || ||||| ||||||||| | Sbjct 1028057 CTTTTGGGCATGAATGCAAAGCTCATGTGCCAGTACATTGAGTTCGTTGCCGACCGCTTG 1028116 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | || ||||| || || ||||||| | ||||||||||| || |||||| Sbjct 1028117 CTCGTGGCTCTTGGCCATCCCAAGGTGTACAGCGTTGCGAACCCCTTTGATTTCATGGAG 1028176 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726 || |||||| || || || |||||||| || ||||| ||| Sbjct 1028177 AATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAGAAGCGAGTC 1028221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879943477400