Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 seq2 91.5 1e-13 >seq1 Length=3734243 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||||||||| |||| || || || ||||| |||||||| || | || || || | || Sbjct 2696316 AAGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGGCCATC 2696257 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||||||||| ||||||| |||||||| || ||||| || || ||||| || Sbjct 2696256 TTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCTTTGTC 2696197 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| || | || | ||||| || || || | ||| | ||| Sbjct 2696196 GGCAATCTTGCTCTTAACGGCATCGATCGTATCCGAACTTTCGACCTCAAGAGTGATGGT 2696137 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| || | || || |||||||| ||||| || Sbjct 2696136 CTTGCCCGTGAGGGTCTTCACGAAAATCTGCATCTT 2696101 >seq2 Length=2224469 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || || | ||||| || |||||||| ||||| || | || ||| || | || Sbjct 961553 AAGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATC 961494 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| ||| | || || ||||||||||| || || || || || || || Sbjct 961493 CTCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATC 961434 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| | || | ||||| || || || | || | ||| Sbjct 961433 GGCAATCTTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGT 961374 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || |||||||| ||||| Sbjct 961373 CTTGCCCGTTAGCGTCTTCACGAAAATCTGCAT 961341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644775017760