Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 7e-24
seq1 84.2 2e-11
>seq3
Length=2099697
Score = 125 bits (138), Expect = 7e-24
Identities = 349/529 (66%), Gaps = 11/529 (2%)
Strand=Plus/Plus
Query 52305 CTGCTGAATGCGTTCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAG 52364
||| | ||||| | ||| | | || ||| || ||||||||| ||||||| ||
Sbjct 1027700 CTGTTCAATGCCATTGAGACCATTCCCTGCATTGCTAAAAAGGCTAAGTGGGCGTTGCGC 1027759
Query 52365 TGGATC-GAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423
|||||| | || || | |||| | || |||||| | ||||| || || || ||
Sbjct 1027760 TGGATCAGTGATCGCGAGT-CCACATTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTGA 1027818
Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483
||| | || || || ||| || || |||||| | | || | | ||| | ||
Sbjct 1027819 GGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGCTAAAGAAGCGCGGCCTCAT 1027878
Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543
||| || || || || || ||| | || || ||||| ||||| |||| || || ||
Sbjct 1027879 GCCTGGTCTTACATTTTCTAATGAGCTAATTTCTCGCGATGAAGGTATGCATACTGATTT 1027938
Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCT-GA 52602
||| ||||||| | || ||| | | ||||| ||| |||| | ||
Sbjct 1027939 TGCTTGCCTCTTGTTCA---CGCACCTT---GAAAACCGCCCGTCGCGTGAGATCATCGA 1027992
Query 52603 GC--ATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660
|| || ||| |||||||| | ||||| ||||| || | || | ||||| || ||
Sbjct 1027993 GCGGATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCCGT 1028052
Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720
|| |||||||||| || || ||||||| ||||||| ||||| || || || ||
Sbjct 1028053 ATCTCTTTTGGGCATGAATGCAAAGCTCATGTGCCAGTACATTGAGTTCGTTGCCGACCG 1028112
Query 52721 TCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTAT 52780
|| | ||| || || || || ||| | || || | || || ||||| || ||
Sbjct 1028113 CTTGCTCGTGGCTCTTGGCCATCCCAAGGTGTACAGCGTTGCGAACCCCTTTGATTTCAT 1028172
Query 52781 GAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829
| | || || ||||||| ||| ||||||||||| || ||||||||||||
Sbjct 1028173 GGAGAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAGAAGCGAGTC 1028221
>seq1
Length=3734243
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 154332 GTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCT 154391
||||| | || |||||||| ||||| ||||||||||| || |||||||||||
Sbjct 1279211 GTGGGCGTTGCATGCGTAAAAAGTTTCTGGCTCATCATATCATAGGTTTCGATGGCCCTA 1279152
Query 154392 TCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCG 154451
|||| ||| || || || |||| ||||||||||||| | || || ||| | ||
Sbjct 1279151 TCGACGTCAGAACCATGTATTCCGACGGCGACGCGCATGAAAAGATGTTGAGGAAGCTCT 1279092
Query 154452 GCGACTCTATTGTCAATCTTCAAGAGATA 154480
|||| | || || |||||||| |||||
Sbjct 1279091 GCGATGCGATCATCGATCTTCAAAAGATA 1279063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262375186880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |