Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 125 7e-24 seq1 84.2 2e-11 >seq3 Length=2099697 Score = 125 bits (138), Expect = 7e-24 Identities = 349/529 (66%), Gaps = 11/529 (2%) Strand=Plus/Plus Query 52305 CTGCTGAATGCGTTCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAG 52364 ||| | ||||| | ||| | | || ||| || ||||||||| ||||||| || Sbjct 1027700 CTGTTCAATGCCATTGAGACCATTCCCTGCATTGCTAAAAAGGCTAAGTGGGCGTTGCGC 1027759 Query 52365 TGGATC-GAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423 |||||| | || || | |||| | || |||||| | ||||| || || || || Sbjct 1027760 TGGATCAGTGATCGCGAGT-CCACATTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTGA 1027818 Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483 ||| | || || || ||| || || |||||| | | || | | ||| | || Sbjct 1027819 GGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGCTAAAGAAGCGCGGCCTCAT 1027878 Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543 ||| || || || || || ||| | || || ||||| ||||| |||| || || || Sbjct 1027879 GCCTGGTCTTACATTTTCTAATGAGCTAATTTCTCGCGATGAAGGTATGCATACTGATTT 1027938 Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCT-GA 52602 ||| ||||||| | || ||| | | ||||| ||| |||| | || Sbjct 1027939 TGCTTGCCTCTTGTTCA---CGCACCTT---GAAAACCGCCCGTCGCGTGAGATCATCGA 1027992 Query 52603 GC--ATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660 || || ||| |||||||| | ||||| ||||| || | || | ||||| || || Sbjct 1027993 GCGGATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCCGT 1028052 Query 52661 CGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCG 52720 || |||||||||| || || ||||||| ||||||| ||||| || || || || Sbjct 1028053 ATCTCTTTTGGGCATGAATGCAAAGCTCATGTGCCAGTACATTGAGTTCGTTGCCGACCG 1028112 Query 52721 TCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTAT 52780 || | ||| || || || || ||| | || || | || || ||||| || || Sbjct 1028113 CTTGCTCGTGGCTCTTGGCCATCCCAAGGTGTACAGCGTTGCGAACCCCTTTGATTTCAT 1028172 Query 52781 GAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 | | || || ||||||| ||| ||||||||||| || |||||||||||| Sbjct 1028173 GGAGAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAGAAGCGAGTC 1028221 >seq1 Length=3734243 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 154332 GTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCT 154391 ||||| | || |||||||| ||||| ||||||||||| || ||||||||||| Sbjct 1279211 GTGGGCGTTGCATGCGTAAAAAGTTTCTGGCTCATCATATCATAGGTTTCGATGGCCCTA 1279152 Query 154392 TCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCG 154451 |||| ||| || || || |||| ||||||||||||| | || || ||| | || Sbjct 1279151 TCGACGTCAGAACCATGTATTCCGACGGCGACGCGCATGAAAAGATGTTGAGGAAGCTCT 1279092 Query 154452 GCGACTCTATTGTCAATCTTCAAGAGATA 154480 |||| | || || |||||||| ||||| Sbjct 1279091 GCGATGCGATCATCGATCTTCAAAAGATA 1279063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262375186880