Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 seq3 98.7 9e-16 seq1 89.7 5e-13 >seq2 Length=2224469 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||| | |||| || ||||| |||||||||||||| || Sbjct 961567 CCACCACGGAGGCGAAGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAG 961508 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| |||||||| || ||||| |||| | |||||||| || || || Sbjct 961507 AGGGTACGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGG 961448 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||| || | || || ||||| || | ||| |||| |||||| || Sbjct 961447 ATGCCCTCCTTATCGGCAATCTTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAACC 961388 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| || | || ||||| || || || || || ||||||||||| ||| Sbjct 961387 TCGAGCGTAATGGTCTTGCCCGTTAGCGTCTTCACGAAAATCTGCATCGCT 961337 >seq3 Length=2099697 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 47367 ATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAG 47426 || |||| ||| || || | || || || |||| |||| | |||| ||||| || || Sbjct 1028018 ATCGAGAAGGAATTCCTCACTGATGCGCTCCCCGTATCTCTTTTGGGCATGAATGCAAAG 1028077 Query 47427 ATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCC 47486 | ||| | ||||||| || || || ||||||||| ||||||| || ||||| Sbjct 1028078 CTCATGTGCCAGTACATTGAGTTCGTTGCCGACCGCTTGCTCGTGGCTCTTGGCCATCCC 1028137 Query 47487 AAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAG 47546 ||| | ||| | | ||| || || || || ||| | || || ||||| | ||| ||| Sbjct 1028138 AAGGTGTACAGCGTTGCGAACCCCTTTGATTTCATGGAGAATATCTCGCTTGCGGGTAAG 1028197 Query 47547 ACCAACTTTTTCGAGAAGCGCGTC 47570 |||||||| || |||||||| ||| Sbjct 1028198 ACCAACTTCTTTGAGAAGCGAGTC 1028221 >seq1 Length=3734243 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| ||||| || ||||| || | ||| || ||| || | ||| || || Sbjct 2696300 GTAGACTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGGCCATCTTCCAACTGCTTGCCG 2696241 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | |||||||||||| ||||| || ||||| ||||| | || || ||| Sbjct 2696240 GCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCTTTGTCGGCAATCTTGCTCTTA 2696181 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | |||| || |||| ||| ||||| || | || | || ||||| || || || Sbjct 2696180 ACGGCATCGATCGTATCCGAACTTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTC 2696121 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 2696120 TTCACGAAAATCTGCAT 2696104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500776224960