Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 125 9e-24 seq3 95.1 1e-14 >seq1 Length=3734243 Score = 125 bits (138), Expect = 9e-24 Identities = 1096/1739 (63%), Gaps = 51/1739 (3%) Strand=Plus/Plus Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622 ||| ||||| || || ||||| |||| ||| |||| | ||||| || || ||| Sbjct 740729 GTAATACATACCGGTTTTGAGACCCTTAGACCAACCATAAAAGTGCATGCTGGTCAGCTT 740788 Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTC 115681 | | ||| ||||| | |||| | | || | | ||||||||||||||| || ||| | Sbjct 740789 GCCCATTGTAGGACTCTGCATGTATATATTGAGAGATTGGGATTGATCGATAAACGCGGC 740848 Query 115682 CCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGA 115741 | |||| || ||||| ||||| | | ||| | || ||||| || || |||| | Sbjct 740849 AC-GATCTGCGGCCATGTCAATGATCGCTTTCTGGCTAATCTCCCAGACTGTCTTGTACA 740907 Query 115742 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG--AC 115799 | | ||| | ||||| || || | |||| || || || || || || | || Sbjct 740908 GCTGCTTCAGTTCATCAGGAATTGACGGGATAGACTGAATTGATCCTCCG--CTAGCAAC 740965 Query 115800 CATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTG 115859 || | | |||||| || | ||| | || || | | ||||| | | | Sbjct 740966 GATACGGTTCTTCATGTCATCGTTCCACAATCCCATTTCGACCAAATCCTTGAGCAAATA 741025 Query 115860 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTA 115919 || || || |||||||| || | || | | ||| ||||| | |||||| Sbjct 741026 TGGGTTCACGACTTGGAACTCACCTGCCAAAACACGACGCGAATAAATGTTTGACGTGTA 741085 Query 115920 TGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 115979 ||||| ||||| ||||| ||||| || |||| ||||| || |||||||| ||||| Sbjct 741086 AGGCTCGAAGCATTCATTAAAGCCCAAAATCTGGGAGGTGGAAGCAGTGGGCATTGGTGC 741145 Query 115980 CATGAGAAGGCTGTTGCGGAGACCCACCCCC--CTAATG-CGTTCCTTGAGGGCGTCCCA 116036 || ||||| |||||| | ||||| | | | | | || |||||||| |||||| Sbjct 741146 CACAAGAAGCGAGTTGCGCA-ACCCATGCTCAGCCATCGACGA--CTTGAGGGTGTCCCA 741202 Query 116037 GTCGTAGTTGAGCTTT--GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGAC 116094 || | || || | | | | |||| | |||||||| || || | || Sbjct 741203 ATCCCAAA-GATCTGAAGGGGTAACAC-CCCAGAGGTCAAACTGCAGCTGGCCCTCTGAA 741260 Query 116095 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCC 116154 || |||||||| | | | |||||| | || || | || | || ||| || Sbjct 741261 GCAGGCGATCCAGGATAAGACTCATAGTGACCATCTCTAGCAGCTAGCTCTACGCTAGCT 741320 Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 116214 || | || ||||| || ||||||||||| || || ||| | | ||||| | Sbjct 741321 TCAATAGCGGCGTGGTATATTGTCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGG 741380 Query 116215 GAATCAAACGCGAGACG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 116272 ||| |||| | ||| | |||| ||| || || | |||||||||||| || Sbjct 741381 CTATCGAACGGCAAACGTAGAGCAAAG--AATGTGTCGGCCAAACCTTGGACACCAAGAG 741438 Query 116273 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCC 116329 |||| |||||||| | ||| || || ||||| ||| || || || | ||| Sbjct 741439 CAATAGGGCGATGGCGCATGTTTGAGCGACGAGC---CTCAGGAACAGGGTAGTAGTTCT 741495 Query 116330 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 116389 | || |||| | || || || | |||||| | | ||||| |||||| || Sbjct 741496 TCTCAATAATGCAGTTGAGGTTCCGAACTAGAACCTTAGCCACATCATGGAGCTTTGCGA 741555 Query 116390 AATCAAA----ACTGCGAG-TCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCA 116443 | | | | ||| | || | | | || || | ||||| |||||||| |||| Sbjct 741556 AGTTATAGAGTACTCCACCATCGCGCTGCTCGAGGTAGCTGGGAAGAGCGATTGAGGCCA 741615 Query 116444 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 116503 || || |||| || || | | |||| | ||| || || | ||| | Sbjct 741616 AGTTGCAAACAGCAACTTCGTCTGGGCTCGAGAACTCGACAATCTCGCAGCAAAGATTGG 741675 Query 116504 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGA 116563 ||||||| || || |||||||||||||| || ||||| || ||||||||||||| Sbjct 741676 AACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACGATTGGCAGCATCCTTGTAGA 741735 Query 116564 GCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCG 116622 ||||||| || | || ||||| ||||||| | ||||| || | ||| | | | | Sbjct 741736 GCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTG 741795 Query 116623 GCTGGCACAGTGGCGTTG-GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAA 116681 || | | || || | || || || ||||||||||||||| || |||| || Sbjct 741796 CCTTG-ATGGT-ACGACGACCTTTACCTAGCTTCTCGTACTTTGTGTACAGCTCCTCGAA 741853 Query 116682 CTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATC-TGGACAGAAGAGAGACCAT 116739 || ||||| ||| | || | || || || | || | |||||| | |||| ||| Sbjct 741854 TTCGTCACCATACA-CGTCGGCTAGACCAGG-ACATTCGCTTGGACACATAAGAGTCCAA 741911 Query 116740 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGA 116799 | ||| |||| | ||| ||||||||||| | ||||| ||||| || || ||| | | Sbjct 741912 TCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAATCCATAGAGCAAGGAATAAA 741971 Query 116800 TCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATA 116859 || || ||| || || | || ||||| ||||| || | ||| || | | Sbjct 741972 TCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCAAATCAATAAACTCAAATACG 742031 Query 116860 TCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGG 116916 || | |||||||| || | || | |||| | ||| ||| | || | || Sbjct 742032 TCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGA 742091 Query 116917 TTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTG- 116975 | || || | || || || | || || | ||| || | ||||||| | | | Sbjct 742092 TCCACGTATCGAGCTGTATTATTGTACACACGCAACATGGGCAAAATACCAT-TGCTGGT 742150 Query 116976 GCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATCGTGGATGTGCATACCAA 117034 || ||||| || |||| || | || | || | | | ||| || | | ||||| Sbjct 742151 ACCGTTTGTTCCAGCAATATATGAGCCTG-TAGCGCGAATGTTGTGAATATTGAGACCAA 742209 Query 117035 TACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 117094 ||||||| || |||| ||||| | || || | | | | |||| ||||| || | Sbjct 742210 TACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTCAACGTATCGTAAATCCCTTCAA 742269 Query 117095 TCGAGTCACCCT-TATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCA 117153 | || ||| ||| ||||| | | ||| || ||||| || | | || |||||| Sbjct 742270 TTGAATCATCCTGCATTTG-AACCAAGAAACATGAGGACATCTGCGCCTGAGGCGTACCA 742328 Query 117154 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTC 117213 || || | | ||| || | ||||| ||||||| ||| ||| || || ||| Sbjct 742329 GCATTATACAAGGTAGGGCTGGCGTGCGTGAACATCTTCTGGCTCATAAGTTCATAAGTC 742388 Query 117214 TCCAAGAC-AGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 ||||| || ||||| ||||| ||||| || || || || || || ||||||| ||||| Sbjct 742389 TCCAAAACTCGAGGG-ATGTCATCCCCATGGATTCCAATAGATACACGCATAATCATGT 742446 >seq3 Length=2099697 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || || | ||| || || || || || || ||||| || || ||||| Sbjct 1027942 AGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACC 1027883 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAAT-CGCACAAAATGAGCCAGAGAAGAAGA 127637 |||||||| || |||||||| | |||||| || | | ||| ||||| |||||||||| Sbjct 1027882 AGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAA-GAGCCTGAGAAGAAGA 1027824 Query 127638 TCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA- 127696 ||||||| ||| || ||||| | || ||||| ||||| | ||||| |||| Sbjct 1027823 TCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATG---TGGACTCGCGATCAC 1027767 Query 127697 --AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCT 127745 | ||| || |||||||| |||||||| | || || || | ||||| Sbjct 1027766 TGATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCT 1027716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507169324640