Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 9e-24
seq3 95.1 1e-14
>seq1
Length=3734243
Score = 125 bits (138), Expect = 9e-24
Identities = 1096/1739 (63%), Gaps = 51/1739 (3%)
Strand=Plus/Plus
Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622
||| ||||| || || ||||| |||| ||| |||| | ||||| || || |||
Sbjct 740729 GTAATACATACCGGTTTTGAGACCCTTAGACCAACCATAAAAGTGCATGCTGGTCAGCTT 740788
Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTC 115681
| | ||| ||||| | |||| | | || | | ||||||||||||||| || ||| |
Sbjct 740789 GCCCATTGTAGGACTCTGCATGTATATATTGAGAGATTGGGATTGATCGATAAACGCGGC 740848
Query 115682 CCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGA 115741
| |||| || ||||| ||||| | | ||| | || ||||| || || |||| |
Sbjct 740849 AC-GATCTGCGGCCATGTCAATGATCGCTTTCTGGCTAATCTCCCAGACTGTCTTGTACA 740907
Query 115742 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG--AC 115799
| | ||| | ||||| || || | |||| || || || || || || | ||
Sbjct 740908 GCTGCTTCAGTTCATCAGGAATTGACGGGATAGACTGAATTGATCCTCCG--CTAGCAAC 740965
Query 115800 CATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTG 115859
|| | | |||||| || | ||| | || || | | ||||| | | |
Sbjct 740966 GATACGGTTCTTCATGTCATCGTTCCACAATCCCATTTCGACCAAATCCTTGAGCAAATA 741025
Query 115860 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTA 115919
|| || || |||||||| || | || | | ||| ||||| | ||||||
Sbjct 741026 TGGGTTCACGACTTGGAACTCACCTGCCAAAACACGACGCGAATAAATGTTTGACGTGTA 741085
Query 115920 TGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 115979
||||| ||||| ||||| ||||| || |||| ||||| || |||||||| |||||
Sbjct 741086 AGGCTCGAAGCATTCATTAAAGCCCAAAATCTGGGAGGTGGAAGCAGTGGGCATTGGTGC 741145
Query 115980 CATGAGAAGGCTGTTGCGGAGACCCACCCCC--CTAATG-CGTTCCTTGAGGGCGTCCCA 116036
|| ||||| |||||| | ||||| | | | | | || |||||||| ||||||
Sbjct 741146 CACAAGAAGCGAGTTGCGCA-ACCCATGCTCAGCCATCGACGA--CTTGAGGGTGTCCCA 741202
Query 116037 GTCGTAGTTGAGCTTT--GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGAC 116094
|| | || || | | | | |||| | |||||||| || || | ||
Sbjct 741203 ATCCCAAA-GATCTGAAGGGGTAACAC-CCCAGAGGTCAAACTGCAGCTGGCCCTCTGAA 741260
Query 116095 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCC 116154
|| |||||||| | | | |||||| | || || | || | || ||| ||
Sbjct 741261 GCAGGCGATCCAGGATAAGACTCATAGTGACCATCTCTAGCAGCTAGCTCTACGCTAGCT 741320
Query 116155 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 116214
|| | || ||||| || ||||||||||| || || ||| | | ||||| |
Sbjct 741321 TCAATAGCGGCGTGGTATATTGTCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGG 741380
Query 116215 GAATCAAACGCGAGACG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 116272
||| |||| | ||| | |||| ||| || || | |||||||||||| ||
Sbjct 741381 CTATCGAACGGCAAACGTAGAGCAAAG--AATGTGTCGGCCAAACCTTGGACACCAAGAG 741438
Query 116273 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCC 116329
|||| |||||||| | ||| || || ||||| ||| || || || | |||
Sbjct 741439 CAATAGGGCGATGGCGCATGTTTGAGCGACGAGC---CTCAGGAACAGGGTAGTAGTTCT 741495
Query 116330 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 116389
| || |||| | || || || | |||||| | | ||||| |||||| ||
Sbjct 741496 TCTCAATAATGCAGTTGAGGTTCCGAACTAGAACCTTAGCCACATCATGGAGCTTTGCGA 741555
Query 116390 AATCAAA----ACTGCGAG-TCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCA 116443
| | | | ||| | || | | | || || | ||||| |||||||| ||||
Sbjct 741556 AGTTATAGAGTACTCCACCATCGCGCTGCTCGAGGTAGCTGGGAAGAGCGATTGAGGCCA 741615
Query 116444 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 116503
|| || |||| || || | | |||| | ||| || || | ||| |
Sbjct 741616 AGTTGCAAACAGCAACTTCGTCTGGGCTCGAGAACTCGACAATCTCGCAGCAAAGATTGG 741675
Query 116504 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGA 116563
||||||| || || |||||||||||||| || ||||| || |||||||||||||
Sbjct 741676 AACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACGATTGGCAGCATCCTTGTAGA 741735
Query 116564 GCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCG 116622
||||||| || | || ||||| ||||||| | ||||| || | ||| | | | |
Sbjct 741736 GCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTG 741795
Query 116623 GCTGGCACAGTGGCGTTG-GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAA 116681
|| | | || || | || || || ||||||||||||||| || |||| ||
Sbjct 741796 CCTTG-ATGGT-ACGACGACCTTTACCTAGCTTCTCGTACTTTGTGTACAGCTCCTCGAA 741853
Query 116682 CTCTTCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATC-TGGACAGAAGAGAGACCAT 116739
|| ||||| ||| | || | || || || | || | |||||| | |||| |||
Sbjct 741854 TTCGTCACCATACA-CGTCGGCTAGACCAGG-ACATTCGCTTGGACACATAAGAGTCCAA 741911
Query 116740 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGA 116799
| ||| |||| | ||| ||||||||||| | ||||| ||||| || || ||| | |
Sbjct 741912 TCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAATCCATAGAGCAAGGAATAAA 741971
Query 116800 TCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATA 116859
|| || ||| || || | || ||||| ||||| || | ||| || | |
Sbjct 741972 TCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCAAATCAATAAACTCAAATACG 742031
Query 116860 TCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGG 116916
|| | |||||||| || | || | |||| | ||| ||| | || | ||
Sbjct 742032 TCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGA 742091
Query 116917 TTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTG- 116975
| || || | || || || | || || | ||| || | ||||||| | | |
Sbjct 742092 TCCACGTATCGAGCTGTATTATTGTACACACGCAACATGGGCAAAATACCAT-TGCTGGT 742150
Query 116976 GCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATCGTGGATGTGCATACCAA 117034
|| ||||| || |||| || | || | || | | | ||| || | | |||||
Sbjct 742151 ACCGTTTGTTCCAGCAATATATGAGCCTG-TAGCGCGAATGTTGTGAATATTGAGACCAA 742209
Query 117035 TACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 117094
||||||| || |||| ||||| | || || | | | | |||| ||||| || |
Sbjct 742210 TACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTCAACGTATCGTAAATCCCTTCAA 742269
Query 117095 TCGAGTCACCCT-TATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCA 117153
| || ||| ||| ||||| | | ||| || ||||| || | | || ||||||
Sbjct 742270 TTGAATCATCCTGCATTTG-AACCAAGAAACATGAGGACATCTGCGCCTGAGGCGTACCA 742328
Query 117154 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTC 117213
|| || | | ||| || | ||||| ||||||| ||| ||| || || |||
Sbjct 742329 GCATTATACAAGGTAGGGCTGGCGTGCGTGAACATCTTCTGGCTCATAAGTTCATAAGTC 742388
Query 117214 TCCAAGAC-AGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271
||||| || ||||| ||||| ||||| || || || || || || ||||||| |||||
Sbjct 742389 TCCAAAACTCGAGGG-ATGTCATCCCCATGGATTCCAATAGATACACGCATAATCATGT 742446
>seq3
Length=2099697
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || || | ||| || || || || || || ||||| || || |||||
Sbjct 1027942 AGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACC 1027883
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAAT-CGCACAAAATGAGCCAGAGAAGAAGA 127637
|||||||| || |||||||| | |||||| || | | ||| ||||| ||||||||||
Sbjct 1027882 AGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAA-GAGCCTGAGAAGAAGA 1027824
Query 127638 TCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA- 127696
||||||| ||| || ||||| | || ||||| ||||| | ||||| ||||
Sbjct 1027823 TCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATG---TGGACTCGCGATCAC 1027767
Query 127697 --AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCT 127745
| ||| || |||||||| |||||||| | || || || | |||||
Sbjct 1027766 TGATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCT 1027716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507169324640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |