Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 seq2 95.1 1e-14 >seq1 Length=3734243 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/218 (71%), Gaps = 10/218 (5%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | |||| |||||||||||| |||||||| || || || || | || || Sbjct 2696313 CACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGGCCATCTTC 2696254 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 | ||||||||||||||| || | |||||||| || | || | | ||| ||||| Sbjct 2696253 CAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCTTTGTCGGC 2696194 Query 46504 GATCTTCTTCTTGA--GCGTCGCCACCGTGTCGCTCGA---TTCCACATCCACCGTGATG 46558 ||||| |||| | || ||| | ||| || ||| ||| || || | |||||| Sbjct 2696193 AATCTTGCTCTTAACGGCATCG--ATCGTATC---CGAACTTTCGACCTCAAGAGTGATG 2696139 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || |||||||| || || || || || || ||||| || Sbjct 2696138 GTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCATCTT 2696101 >seq2 Length=2224469 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/197 (72%), Gaps = 10/197 (5%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| ||||||||||| || || || || | || || ||||||||||| || || Sbjct 961532 CTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCCTCTAGCTGCTTGCCAGCAAA 961473 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG--AGC 46519 || | ||||||||||| | || | || |||||| || ||||| ||||| ||| Sbjct 961472 GATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGCAATCTTGCTCTTGACAGC 961413 Query 46520 GTCGCCACCGTGTCGCTCGA---TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 || | | || || ||| || || || | ||| ||||| |||||||| ||||| Sbjct 961412 GT--CAATGGTATC---CGAACTCTCAACCTCGAGCGTAATGGTCTTGCCCGTTAGCGTC 961358 Query 46577 TTAACAAAGATTTGCAT 46593 || || || || ||||| Sbjct 961357 TTCACGAAAATCTGCAT 961341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238371738080