Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3 233 2e-56
seq1 104 2e-17
>seq3
Length=2099697
Score = 233 bits (258), Expect = 2e-56
Identities = 553/823 (67%), Gaps = 17/823 (2%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
|||||||| || || || || ||| | | || || | ||| ||||| ||||||||
Sbjct 1028214 TTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAAGGGGTTC 1028155
Query 132685 GCTGTGTTGTAGTGCTTGG--TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACT 132742
|| | |||| ||||| || | | || | ||||||| | |||||| |||||||
Sbjct 1028154 GCAACGCTGTACACCTTGGGATGGCCAAGAG--CCACGAGCAAGCGGTCGGCAACGAACT 1028097
Query 132743 CGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCG 132801
| ||||| || ||||| | || ||| | | | |||| ||| || || ||||| ||
Sbjct 1028096 CAATGTACTGGCACATGAGCTTTGCATTCATG-CCCAAAAGAGATACGGGGAGCGCATCA 1028038
Query 132802 GTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGC-CGC 132860
||||| || | |||||| | ||||| || |||| || | | | | | |||
Sbjct 1028037 GTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGCTCGATGATCTCACGC 1027978
Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920
| ||| ||| | | ||| |||||| | ||||||||| || ||||| || ||
Sbjct 1027977 GACGGGCGGTTTT-CAAGGTGCGTGAACAAGAGGCAAGCAAAATCAGTATGCATACCTTC 1027919
Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980
|| | ||||| || || || || || | || |||||||||||||| || || ||
Sbjct 1027918 ATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCATGAGGCCGCGCTTCTTTAG 1027859
Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040
||| || ||| |||||| ||| || ||||||| ||||| || || || || |||||
Sbjct 1027858 CCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCCCTCAACAGCAGCAAACGCCAC 1027799
Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC-GATCCAGCGCAGCGCCCATTCGGCCT 133099
|||||||| | || |||| || | | | ||||||||||| |||||| | ||||
Sbjct 1027798 AAGGCGCTCTGCAAATGTGGACTC-GCGATCACTGATCCAGCGCAACGCCCACTTAGCCT 1027740
Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGG 133159
||| | ||| || || || || ||||| || |||| | || ||||| | ||
Sbjct 1027739 TTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAACAGGTGCTGTGCCTCTTTC--GG 1027682
Query 133160 AAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGC 133217
| | | || ||||| || ||| || || | |||||||| | ||||||||
Sbjct 1027681 ATCCTTAATATATGTGTCAATCAGGAGTGAGTAAGTCTCCGAGTGAATATTCTCCATCAT 1027622
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
|||||| || || ||||| ||| ||||| | |||||||| || ||| |||||
Sbjct 1027621 GATTTGGAATCCATAAAAACACTTTGCCTCAGGGATTTGCACTTCACCAGAGAACCGCTC 1027562
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
||||| || |||||||| ||||||||| ||| |||||||| || || || | | ||
Sbjct 1027561 AACCAGGTTCTCGTTGACAATGCCGTCGGAGGCTGCGAAAAATGCGAGTACATTCGAAAT 1027502
Query 133338 GAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
||| ||||| | | ||||| ||| |||||||| | ||||| || ||
Sbjct 1027501 GAAGAATCGCTCATCCTTGTTCATGCGATTGTCCCAGTCATTCAAATCCTTACCGAGATC 1027442
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437
| ||| ||| | ||||| || || ||||| ||||| || |||
Sbjct 1027441 AATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGCTTTCTTATAC 1027399
>seq1
Length=3734243
Score = 104 bits (114), Expect = 2e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||||||||| |||||||| | || |||||
Sbjct 2696101 AAGATGCAGATTTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAAAGT 2696160
Query 38301 ACCGACAGCGTGCAAACGCTTAA-AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| || | | | | |||| || || | | | |||||||||||| || || | ||
Sbjct 2696161 TCGGATACGATCGATGCCGTTAAGAGCAAGATTGC-CGACAAAGAGGGTATCCCTCCTGA 2696219
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||||| ||||||| ||| ||||| ||| |||| || | || || ||| |||||
Sbjct 2696220 TCAGCAGCGACTCATTTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACGCTCTCGGACTA 2696279
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||||||||| | || || || | ||||| ||
Sbjct 2696280 CAACATCCAAAAGGAGTCTACACTTCACCTAGTGCTTCG 2696318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172774991360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |