Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3 140 1e-27 seq1 84.2 9e-11 >seq3 Length=2099697 Score = 140 bits (154), Expect = 1e-27 Identities = 205/290 (71%), Gaps = 9/290 (3%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || |||||||||| ||||| ||||| || ||||| || || ||||| |||| Sbjct 1670301 ATGCTGTCGTTACTGTTCCTGCTTACTTCAACGACAGTCAACGCCAGGCCACTAAGGATG 1670360 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || |||| || || |||||||| || | | || || |||||||| || ||| Sbjct 1670361 CTGGTCAGATTGTGGGCTTGAATGTTCTGCGTGTCGTGAACGAGCCTACAGCTGCGGCTT 1670420 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 | || ||||| || ||| || ||| || || || |||| || || ||| Sbjct 1670421 TGGCTTATGG-CTTGGAGAA--------AACTGATGATAAGGTTATTGCCGTTTTCGATC 1670471 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | ||||| || || |||| |||| | || |||| | | || || || ||||| | Sbjct 1670472 TAGGTGGTGGTACGTTCGATATTTCTATTCTCGAAATTCAGAAGGGCGTGTTCGAAGTGA 1670531 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCA 451609 || |||||||||||||||||||||| || |||||||| |||| | |||| Sbjct 1670532 AGTCAACCAATGGTGATACTCATCTCGGTGGTGAAGACTTTGACATTGCA 1670581 >seq1 Length=3734243 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || || || || |||||||| || ||| || Sbjct 2696104 ATGCAGATTTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAAAGTTCG 2696163 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || || |||| || ||| || || || || || ||||||||||| Sbjct 2696164 GATACGATCGATGCCGTTAAGAGCAAGATTGCCGACAAAGAGGGTATCCCTCCTGATCAG 2696223 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | |||||| | || || || | |||||||| | || | |||| || || Sbjct 2696224 CAGCGACTCATTTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACGCTCTCGGACTACAAC 2696283 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | ||||||||| |||| Sbjct 2696284 ATCCAAAAGGAGTCTACACTTCACCTAGT 2696312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718298744432