Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 188 5e-42 >seq1 Length=3734243 Score = 188 bits (208), Expect = 5e-42 Identities = 885/1383 (64%), Gaps = 32/1383 (2%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | ||| || ||||| ||||| |||||||| || | | || || Sbjct 1810906 ATACCGTTGGCATCAACATCGAAAGTGACCTCAATCTGAGGGACACCACGAGGCGCGGGG 1810847 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | ||| | || || ||| ||||| ||||| | || ||| Sbjct 1810846 GGGATGCCAGAGAGCTCGAATTTACCGAGCAAATTGTTATCCTTAGTTAGCGGACGCTCA 1810787 Query 517394 CCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAAA---TAC 517449 |||||||| | ||||| |||| | | | ||||| || | ||||| | || | | Sbjct 1810786 CCCTCGAAGACCTGGATGAGTA-CACCGGGCTGATTGTCGGCGTAAGTGGAGAAGGTTTC 1810728 Query 517450 TCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509 || || || |||||| || | ||| | ||| | ||||| | ||| || Sbjct 1810727 ACTC---TTCTTGGTAGGAATGGTCGAGTTGCGCGGAATCAGCTTGGTGAACTGACCGCC 1810671 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 517569 || || || | ||| | |||||||| | |||||| | || || || || ||| || | Sbjct 1810670 AGCGGTCTCAATACCCATCGAAAGAGGCGCGACATCGAGTAAGAGAAGATCCTGA-GTCT 1810612 Query 517570 TTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 | | | || | ||| ||||| || ||||||| |||||| || || |||||||||| Sbjct 1810611 TCGACGAAGTGTCACCCGAGAGAATTGCAGCTTGAACAGCAGCGCCGTAAGCAACAGCTT 1810552 Query 517629 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTC 517688 ||||||| || | | | || || | |||||| ||| || | || | ||| | || Sbjct 1810551 CATCAGGGTTGATTGACTTGTTGAGCTCTTTACCCGAGAAGAAGTCAGACACAAGCT-TC 1810493 Query 517689 T-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 517747 | |||||| || ||||||| || || || || | |||| ||| || || | || Sbjct 1810492 TGTACCTTGGGGATACGAGTGGAGCCACCGACCATGACAACTTCCTGGACGCTAGCCTTG 1810433 Query 517748 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCT 517807 || | |||| |||| | ||| || || || || | | | | || | || Sbjct 1810432 TCGATCTTTGCATCCTTCAGAACCTTCTCTACTGGGGCGATTGTCTGACGGAAGAGATCC 1810373 Query 517808 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGA 517865 || ||||| ||||| || | || || ||| | || || || || || ||| Sbjct 1810372 TGGCAGAGTTCCTCGAAGCGGGCAC--GTGTGATCGACGTATAGAAGTCGATACCCTCGT 1810315 Query 517866 ACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTT 517925 ||| ||| || | || || | ||| ||||| || |||||| ||||| || ||||| | Sbjct 1810314 ACAGAGAGTCGATCTCGATGGGAGTCTGAGTGGAGCTAGATAGCGCACGCTTGGCACGCT 1810255 Query 517926 CACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATA 517983 | || || || | ||| | || | || |||||||| | | | || | || || Sbjct 1810254 CGCAAGCAGTACGTAGACGGCGGAGAGC--ACGCTGATTGCCAGTAATGTCCTTCTTGTA 1810197 Query 517984 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 518043 || | |||||| || | || | | ||||| || ||||| ||||| ||||| || Sbjct 1810196 CTTGCGCTTGAACTCAGTAGCAAAGTGGTTCACAAGGCGGTTATCGAAATCCTCACCACC 1810137 Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103 ||| | ||||| || | ||||| | |||| ||||| ||||| |||| | ||| Sbjct 1810136 CAAGTGAGTATCACCAGCGGTAGCCTTGACTTCGAAAATGCCATCGTCAATGCTGAGAAG 1810077 Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163 | ||||| || |||||||||| ||| || || | ||||| || | Sbjct 1810076 CGAGACATCGAATGTACCACCACCCAAATCGAAGATCAAGACATTGTGGTCACCAACGGA 1810017 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 || || |||||||| || |||| || ||||| || || || || || || | | || Sbjct 1810016 CTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATACGCTGCAC 1809957 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 || | ||| ||||| || ||||| || || ||||| | || |||||||| || || Sbjct 1809956 GTTCAAACCGGCAATAAGGCCAGCATCCTTGGTAGCTTGACGCTGAGAATCGTTGAAGTA 1809897 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCG--CT-TGCCGT 518340 |||||||| || ||||| || | | | |||||||| ||| || || || Sbjct 1809896 AGCAGGAACGGTGATAACAGCGT---TCTCAACTTTACCACCGAGTGCGGACTCGGCGGT 1809840 Query 518341 TTGTTTCATTTTACTTAAAATCAT--TGATGAAATTTGTTCTGGGGA-ATATTGCTTGGA 518397 || ||||| || | | |||||| || || | || ||| || || | | | |||| Sbjct 1809839 TTCCTTCATCTTGCCCAGAATCATGCTGCTG--ACTTCTTCGGGAGAGAGAGT-CTTGCT 1809783 Query 518398 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 518457 ||| | |||| || | | | || ||| || |||| ||| || || || Sbjct 1809782 CTCACCCTTATATTCGACCTGGATGAACGGCTTACCTCCCTGGTTAACAACCTTGAAGGG 1809723 Query 518458 CCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTT 518517 ||| ||| ||||| | |||| | | || | || | | ||||| | || || Sbjct 1809722 GAAGTGTTTAATATCAGCCTGAATAGCCGGATCGTCGAACTTACGGCCAATAAGACGCTT 1809663 Query 518518 TGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAAT 518577 ||||| || | || |||| || || || ||||| || | || || ||||| || || Sbjct 1809662 AGCATCGAATACTGTGTTGGACGGGTTCATCGCAGCCTGGTTCTTAGCAGCATCACCGAT 1809603 Query 518578 CAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATT 518637 ||| | || | || || || | || ||||| || || || || ||||| ||||| || Sbjct 1809602 GAGACGCTCGGAATCAGTGAAAGCGACGTATGAGGGTGTGGTTCGGTTACCCTGATCGTT 1809543 Query 518638 CGC 518640 || Sbjct 1809542 GGC 1809540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780822201506824