Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 277 2e-69 seq3 84.2 3e-11 >seq1 Length=3734243 Score = 277 bits (306), Expect = 2e-69 Identities = 1164/1808 (64%), Gaps = 71/1808 (4%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| | ||||| || | || || ||||||||||| || || | || Sbjct 742454 CCCACAGCACATGATTATGCGTGTATCTATTGGAATCCATGGGGATGACATCCCTCGAGT 742395 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 ||||||||| || || ||| || ||||||| ||||| | || ||| | | Sbjct 742394 TTTGGAGACTTATGAACTTATGAGCCAGAAGATGTTCACGCACGCCAGCCCTACCTTGTA 742335 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 || |||||||| || | || |||||| |||||| | || || |||| || Sbjct 742334 TAATGCTGGTACGCCTCAGGCGCAGATGTCCTCATGTTTCTTGGTTCAAATGCAGGATGA 742275 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 |||||| | || ||||||| || | | ||||| | ||||| |||| ||||| Sbjct 742274 TTCAATTGAAGGGATTTACGATACGTTGAAGACTTGTGCGCTCATCTCTAAGTCTGCTGG 742215 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAA 111909 ||||| || | | || || | | | || | || | || |||| || |||| Sbjct 742214 GGGTATTGGTCTCAATATTCACAACATTCGCGCTA-CAGGCTCATATATTGCTGGAACAA 742156 Query 111910 ATGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 | ||| | | || |||||||| | || ||| | || || | || ||||| || || Sbjct 742155 ACGGTACCAGCA-ATGGTATTTTGCCCATGTTGCGTGTGTACAATAATACAGCTCGATAC 742097 Query 111969 GTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 || | |||| || | ||| ||| || ||||| | ||| | ||||| ||||| Sbjct 742096 GTGGATCAAGGCGGCAATAAGCGCCCGGGTGCTTTCGCAATTTATTTAGAGCCGTGGCAT 742037 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 | || | | ||||| |||| ||||| || || || | |||||| || ||| Sbjct 742036 GATGACGTATTTGAGTTTATTGATTTGCGGAAAAATCATGGAAAAGAGGAGATTCG-TGC 741978 Query 112086 -CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 || ||| | ||| ||||| |||||||||||| | ||||||||| | ||| | ||| Sbjct 741977 GCGAGATTTATTCCTTGCTCTATGGATTCCAGATTTGTTCATGAAGCGCGTTAAAGAGGA 741918 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG---GG 112201 ||| ||||| |||| | |||||| | | || ||||| |||| |||| || Sbjct 741917 TGGAGATTGGACTCTTATGTGTCCAAGCGAATGTCCTGGTCTAGCCGA---CGTGTATGG 741861 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 ||| || || || | || ||||||||||||||| || | || | || || | Sbjct 741860 TGACGAATTCGAGGAGCTGTACACAAAGTACGAG----AAGCTAGGTAAAGGTCGTCG-T 741806 Query 112262 GCCAGCT--GCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 ||| | || | ||||| | || ||||| | | ||||| ||||| |||| Sbjct 741805 ACCATCAAGGCACAAAAACTGTGGTACGCAATTCTTGAAGCCCAAACTGAGACAGGTAAT 741746 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 || |||||||| ||||| || || || | ||| ||| |||||||| |||||| Sbjct 741745 CCGTATATGCTCTACAAGGATGCTGCCAATCGTAAGTCTAACCAAAAGAACTTGGGTACA 741686 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 |||||||||||||| || || || || | || || | | ||| || ||| Sbjct 741685 ATCAAGAGTTCCAATCTTTGCTGCGAGATTGTCGAGTTCTCGAGCCCAGACGAAGTTGCT 741626 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG------ 112490 || || ||| | || ||||||||||| |||| || | || | || | | | Sbjct 741625 GTTTGCAACTTGGCCTCAATCGCTCTTCCCAGCTACCTCGAGC-AGCGCGATGGTGGAGT 741567 Query 112491 ACATT-TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549 || | | | | | ||| ||||| || || | || | | ||||| ||| | Sbjct 741566 ACTCTATAACTTCGCAAAGCTCCATGATGTGGCTAAGGTTCTAGTTCGGAACCTCAACTG 741507 Query 112550 AGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACA 112606 ||||||| | || | ||||| ||| ||| |||||| || || ||| | || Sbjct 741506 CATTATTGAGAAGAACTACTACCCTGTTCCTGAG---GCTCGTCGCTCAAACATGCGCCA 741450 Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG- 112665 || || |||| ||| |||||||||||| | || || ||||||||| | | ||| Sbjct 741449 TCGCCCTATTGCTCTTGGTGTCCAAGGTTTGGCCGACA----CATTCTTTG-CTCTACGT 741395 Query 112666 ----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTAT 112721 | || ||| | || ||| || ||||| | |||||||||||||| || Sbjct 741394 TTGCCGTTCGATAGCCCTGAGGCGCGCGAGCTCAATATTCAAATATTTGAGACAATATAC 741335 Query 112722 CACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781 ||||||||| |||| || || ||| | || | ||||||| ||||| | | | Sbjct 741334 CACGCCGCTATTGAAGCTAGCGTAGAGCTAGCTGCTAGAGATGGTCACTATGAGTCTTAT 741275 Query 112782 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG 112841 || || || |||||| | || ||| || ||||| | |||| ||| ||| Sbjct 741274 CCTGGATCGCCTGCTTCAGAGGGCCAGCTGCAGTTTGACCTCTGGG---GTGTTACCC-- 741220 Query 112842 CTTCACTAC-----GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTA 112896 ||||| | || |||||| | |||||| || ||| | || | || | Sbjct 741219 CTTCAGATCTTTGGGATTGGGACACCCTCAAGTCGTCGATGGCTGAGCATGGGTTGCGCA 741160 Query 112897 ACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATG 112956 || ||| | ||||||||||||| || || |||||| | || || ||||| ||||| Sbjct 741159 ACTCGCTTCTTGTGGCACCAATGCCCACTGCTTCCACCTCCCAGATTTTGGGCTTTAATG 741100 Query 112957 AATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTG 113016 ||||||| || || |||||| | ||||| ||| | | | | || || ||||| Sbjct 741099 AATGCTTCGAGCCTTACACGTCAAACATTTATTCGCGTCGTGTTTTGGCAGGTGAGTTCC 741040 Query 113017 TGATTGTCAACAAGCAT---CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGG 113073 | || ||| || ||| |||| || || || || | ||| | | | Sbjct 741039 AAGTCGTGAACCCATATTTGCTCAAGGATTTGGTCGAA---ATGGGATTGTGGAACGATG 740983 Query 113074 ATATGAAGGATCTCATGGT-GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCA 113132 | |||||| | | || || | ||||| || || ||||| ||| | ||||| Sbjct 740982 ACATGAAGAACCGTATCGTTGCTAGCGGA-GGATCAATTCAGTCTATCCCGTCAATTCCT 740924 Query 113133 GATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGAC 113192 |||||| | ||| || ||||| ||||| ||||| || | ||| | |||||||| Sbjct 740923 GATGAACTGAAGCAGCTGTACAAGACAGTCTGGGAGATTAGCCAGAAAGCGATCATTGAC 740864 Query 113193 ATGGCCGCAGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGA 113251 |||||||||||||||| ||| || || |||||| ||| | | ||| ||| |||| | Sbjct 740863 ATGGCCGCAGATCGTGC-CGCGTTTATCGATCAATCCCAATCTCTCAATATATACATGCA 740805 Query 113252 AAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAA 113311 ||||| || ||| |||||| | |||||| | || ||||| ||||||||||| Sbjct 740804 GAGTCCTACAATGGGCAAGCTGACCAGCATGCACTTTTATGGTTGGTCTAAGGGTCTCAA 740745 Query 113312 AACGGGGATGTATTACCTCCGATCTAAGGCA-AAGGCGCGCCCAATTCAGTTCAGTCTTG 113370 ||| || ||||||||| | || || ||||| |||| ||||| ||||||| | ||| Sbjct 740744 AACCGGTATGTATTACTTGCGCACTCAGGCAGCTTCCGCG-CCAATCCAGTTCACTGTTG 740686 Query 113371 AACCAGAA 113378 | | |||| Sbjct 740685 ATCAAGAA 740678 >seq3 Length=2099697 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 ||||| ||||| || | || ||||| ||||||||| ||||||||||| || || ||| Sbjct 1027784 TTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTTC 1027843 Query 102234 TGC--GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || || || | ||||| |||||||| || |||||||| ||||| || || || | Sbjct 1027844 -GCAAGC-ATCTTCTGGCTAAAGAAGCGCGGCCTCATGCCTGGTCTTACATTTTCTAATG 1027901 Query 102292 AGCTTATCTCTCGTGACGAGGG 102313 |||| || ||||| || || || Sbjct 1027902 AGCTAATTTCTCGCGATGAAGG 1027923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742368962880