Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 3e-16
seq1 96.9 4e-15
>seq3
Length=2099697
Score = 100 bits (110), Expect = 3e-16
Identities = 162/229 (71%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 11683 GCGTCAATCTCATCGATGAATACGATACACGG---TTGGTTGGCACGTGCCTGTTCGAAA 11739
|| || ||||||||||| ||||| || |||| || ||| ||||| | |||||
Sbjct 125872 GCATCGATCTCATCGATAAATACAATGGACGGCGCTTCCTTG---CGTGCAGTTGCGAAA 125816
Query 11740 AGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAA 11799
|| |||||||||||| || || ||||| ||||||||||| || || | | | ||
Sbjct 125815 AGATCACGTACACGCGAAGCGCCGACACCAACGAACATCTCCACAAACTCGGATCCTGAG 125756
Query 11800 CACTGAAT-GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACC 11858
|| || | ||| ||||| | |||||| ||| | ||| || ||||| ||||||||
Sbjct 125755 -ACAGAGTAGAAAGGAACGCCTGCCTCACCCGCGGTTGCTTTGGCAAGGAGGGTCTTACC 125697
Query 11859 CGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907
|| || |||| ||| | || || ||||| ||||||||||| |||
Sbjct 125696 GGTTCCCGGTGGCCCACTTAAAATAGCACCACGCGGGATCTTGGCTCCA 125648
Score = 87.8 bits (96), Expect = 2e-12
Identities = 204/304 (67%), Gaps = 13/304 (4%)
Strand=Plus/Minus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555
||||| || ||| | |||||||| ||||| || ||||||||| || ||| |||
Sbjct 1027941 GCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCA 1027882
Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615
|||||||| || | ||||||||||| |||||| ||| || || ||||||||
Sbjct 1027881 GGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATC 1027822
Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGG----TCGAGACTTGTCGAA 119671
||||| ||| || || || | || ||||| ||||| | ||| || | ||
Sbjct 1027821 CCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCGCGATCACT-GAT 1027763
Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731
||| | ||||| || ||||| | |||||||| | || | ||||| | |||
Sbjct 1027762 CCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAA 1027703
Query 119732 AAGTTGCTT---CT-TTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGG 119787
|| |||| || |||| | ||||||||||||| | ||||| || ||||| |
Sbjct 1027702 CAGGTGCTGTGCCTCTTTCGG----ATCCTTAATATATGTGTCAATCAGGAGTGAGTAAG 1027647
Query 119788 TCTC 119791
||||
Sbjct 1027646 TCTC 1027643
>seq1
Length=3734243
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/204 (72%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 109414 TAATACATACCCGTTTTGAGACCAGCCTT---CCATGCGTACATATGCATTGAAGAGAGT 109470
||||||||||| |||||||||| |||| ||| | || | ||||| | ||
Sbjct 740730 TAATACATACCGGTTTTGAGAC---CCTTAGACCAACCATAAAAGTGCATGCTGGTCAGC 740786
Query 109471 TTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGA 109530
||| | ||| ||||||| ||| | | || | || || || |||||||| ||
Sbjct 740787 TTGCCCATTGTAGGACTCTGCATGTATATATTGAGAGATTGGGATTGATCGATAAACGCG 740846
Query 109531 CCACGATCAGCCGCCATGTCGATGATACACTTT-TGGCTAATTTCCCAGACAGTCTTGTA 109589
||||||| || |||||||| ||||| | |||| |||||||| |||||||| ||||||||
Sbjct 740847 GCACGATCTGCGGCCATGTCAATGAT-CGCTTTCTGGCTAATCTCCCAGACTGTCTTGTA 740905
Query 109590 CAAATTCTTGATATCATCGGGAAT 109613
|| | ||| | ||||| |||||
Sbjct 740906 CAGCTGCTTCAGTTCATCAGGAAT 740929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975970551200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |