Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-16 seq1 96.9 4e-15 >seq3 Length=2099697 Score = 100 bits (110), Expect = 3e-16 Identities = 162/229 (71%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 11683 GCGTCAATCTCATCGATGAATACGATACACGG---TTGGTTGGCACGTGCCTGTTCGAAA 11739 || || ||||||||||| ||||| || |||| || ||| ||||| | ||||| Sbjct 125872 GCATCGATCTCATCGATAAATACAATGGACGGCGCTTCCTTG---CGTGCAGTTGCGAAA 125816 Query 11740 AGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAA 11799 || |||||||||||| || || ||||| ||||||||||| || || | | | || Sbjct 125815 AGATCACGTACACGCGAAGCGCCGACACCAACGAACATCTCCACAAACTCGGATCCTGAG 125756 Query 11800 CACTGAAT-GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACC 11858 || || | ||| ||||| | |||||| ||| | ||| || ||||| |||||||| Sbjct 125755 -ACAGAGTAGAAAGGAACGCCTGCCTCACCCGCGGTTGCTTTGGCAAGGAGGGTCTTACC 125697 Query 11859 CGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 || || |||| ||| | || || ||||| ||||||||||| ||| Sbjct 125696 GGTTCCCGGTGGCCCACTTAAAATAGCACCACGCGGGATCTTGGCTCCA 125648 Score = 87.8 bits (96), Expect = 2e-12 Identities = 204/304 (67%), Gaps = 13/304 (4%) Strand=Plus/Minus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||| | |||||||| ||||| || ||||||||| || ||| ||| Sbjct 1027941 GCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCA 1027882 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 |||||||| || | ||||||||||| |||||| ||| || || |||||||| Sbjct 1027881 GGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATC 1027822 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGG----TCGAGACTTGTCGAA 119671 ||||| ||| || || || | || ||||| ||||| | ||| || | || Sbjct 1027821 CCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCGCGATCACT-GAT 1027763 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731 ||| | ||||| || ||||| | |||||||| | || | ||||| | ||| Sbjct 1027762 CCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAA 1027703 Query 119732 AAGTTGCTT---CT-TTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGG 119787 || |||| || |||| | ||||||||||||| | ||||| || ||||| | Sbjct 1027702 CAGGTGCTGTGCCTCTTTCGG----ATCCTTAATATATGTGTCAATCAGGAGTGAGTAAG 1027647 Query 119788 TCTC 119791 |||| Sbjct 1027646 TCTC 1027643 >seq1 Length=3734243 Score = 96.9 bits (106), Expect = 4e-15 Identities = 146/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 109414 TAATACATACCCGTTTTGAGACCAGCCTT---CCATGCGTACATATGCATTGAAGAGAGT 109470 ||||||||||| |||||||||| |||| ||| | || | ||||| | || Sbjct 740730 TAATACATACCGGTTTTGAGAC---CCTTAGACCAACCATAAAAGTGCATGCTGGTCAGC 740786 Query 109471 TTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGA 109530 ||| | ||| ||||||| ||| | | || | || || || |||||||| || Sbjct 740787 TTGCCCATTGTAGGACTCTGCATGTATATATTGAGAGATTGGGATTGATCGATAAACGCG 740846 Query 109531 CCACGATCAGCCGCCATGTCGATGATACACTTT-TGGCTAATTTCCCAGACAGTCTTGTA 109589 ||||||| || |||||||| ||||| | |||| |||||||| |||||||| |||||||| Sbjct 740847 GCACGATCTGCGGCCATGTCAATGAT-CGCTTTCTGGCTAATCTCCCAGACTGTCTTGTA 740905 Query 109590 CAAATTCTTGATATCATCGGGAAT 109613 || | ||| | ||||| ||||| Sbjct 740906 CAGCTGCTTCAGTTCATCAGGAAT 740929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975970551200