Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 183 4e-41 seq3 96.9 4e-15 >seq1 Length=3734243 Score = 183 bits (202), Expect = 4e-41 Identities = 560/856 (65%), Gaps = 15/856 (2%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT-GTGTACTCTAA 106515 ||||| |||||||| ||||| ||||||||||| || || | || | | |||| | Sbjct 741597 GGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTC-TGGGCTCGAGAACTCGAC 741655 Query 106516 AATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTT 106575 ||| || || | ||||||||||| || || ||||| |||||||||||| ||| Sbjct 741656 AATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACG 741715 Query 106576 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAAT 106635 ||| ||||||||||||||||| || || | || ||||| || || | | ||||| Sbjct 741716 ATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAAT 741775 Query 106636 TGCCTTCCACA-CATCGGCGGCTGGTACAATGG--CGTTGGCCCGTCCCT-CCGCCTCGT 106691 ||| | ||||| | | | || | |||| || | || | ||| | ||||| Sbjct 741776 TGCGTACCACAGTTTTTGTGCCTTG----ATGGTACGACGACCTTTACCTAGCTTCTCGT 741831 Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 106751 |||||||||| || | || || || ||||| | |||||| ||||| || | | Sbjct 741832 ACTTTGTGTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTAGACCAGGACATTCGC 741891 Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811 |||||| | ||||| ||| | ||| |||| | ||| ||||||||||| | ||||||| Sbjct 741892 TTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAA 741951 Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 |||| || | || | ||||| ||| ||| || | || || || || | Sbjct 741952 TCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCA 742011 Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCT 106931 | |||| ||||| | | || | ||||| ||||| | ||| | ||||| || ||| Sbjct 742012 AATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCG 742071 Query 106932 TTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988 || | || |||||| || || || ||||| || | || || | ||| | Sbjct 742072 GGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACACACGCAACATGG 742131 Query 106989 GAATAATACCATCTGATTG-ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 107047 | | |||||||| || | | ||| ||||| || |||| || | || | | Sbjct 742132 GCAAAATACCAT-TGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGTAGCGCGAATG 742190 Query 107048 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 107107 | || || | | |||||||||||||| |||| ||||| ||||||| | | | Sbjct 742191 TTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTCAAC 742250 Query 107108 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 107167 || | || || || | ||||| || |||| | | | ||| || ||||||| Sbjct 742251 GTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGAAACATGAGGACATC 742310 Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227 |||| || ||||||||||| | | ||| || | ||||| ||||||| ||| Sbjct 742311 TGCGCCTGAGGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCGTGAACATCTTCTGG 742370 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 ||| || || |||||||| || | ||||| ||||| ||||| || || | Sbjct 742371 CTCATAAGTTCATAAGTCTCCAAAACTCGAGGGATGTCATCCCCATGGATTCCAATAGAT 742430 Query 107288 ACACGCATAAACATGT 107303 |||||||||| ||||| Sbjct 742431 ACACGCATAATCATGT 742446 >seq3 Length=2099697 Score = 96.9 bits (106), Expect = 4e-15 Identities = 384/587 (65%), Gaps = 32/587 (5%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 |||||| |||||||||||||||||||||||||| || |||| || || ||||| Sbjct 1028229 TAGTCCGAGACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATG 1028170 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGGG-TGGCACCCCAACTTGTTTGAGGAG 117101 || ||||| || ||| || | | | |||| |||| ||| ||| | Sbjct 1028169 AAATCAAAGGGGTTCGCAACGCTGTACACCTTGGGATGGC----CAAGAGCCACGAGCAA 1028114 Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT- 117160 || || | || |||||||||||| | |||| || | ||||| || | ||| Sbjct 1028113 GCGGTCGGCAACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGA 1028054 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||| ||||| || || || ||| | ||||| |||||||||||||| | | || Sbjct 1028053 TACG-GGGAGCGCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCC 1027995 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGA-GCTCCACGGCAAA 117278 | ||| | || | || | || ||| || | |||| | | || | |||| Sbjct 1027994 GCTCGATGATCTCACGCGACGGGCGGTTTT-CAAGGTGCGTGAACAAGAGGCAAG-CAAA 1027937 Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338 || || | ||| ||||| || ||||| || ||||| || || || || ||||| Sbjct 1027936 ATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCAT 1027877 Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGC--GCAGAATGACCCGGAGAAGAAGATACCC 117396 ||| || |||||||| | ||| | || || || ||| || || ||||||||||| ||| Sbjct 1027876 GAGGCCGCGCTTCTTTAGCCAGAAGAT-GCTTGC-GAAAGAGCCTGAGAAGAAGATCCCC 1027819 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AAC 117453 || ||| |||||||| | ||||||||| || || | | |||| ||| | | Sbjct 1027818 TCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTG---GACTCGCGATCACTGATC 1027762 Query 117454 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAAT 117513 || || ||||| || ||||| || |||| || || | || | ||||| | || Sbjct 1027761 CAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAAC 1027702 Query 117514 AACTGCT---TCT-TTTCAGATCCATCCTTAATGTATTTGTCAATCA 117556 | |||| || |||| | ||||||||| ||| ||||||||| Sbjct 1027701 AGGTGCTGTGCCTCTTTCGG----ATCCTTAATATATGTGTCAATCA 1027659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980770500960