Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 183 4e-41
seq3 96.9 4e-15
>seq1
Length=3734243
Score = 183 bits (202), Expect = 4e-41
Identities = 560/856 (65%), Gaps = 15/856 (2%)
Strand=Plus/Plus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT-GTGTACTCTAA 106515
||||| |||||||| ||||| ||||||||||| || || | || | | |||| |
Sbjct 741597 GGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTC-TGGGCTCGAGAACTCGAC 741655
Query 106516 AATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTT 106575
||| || || | ||||||||||| || || ||||| |||||||||||| |||
Sbjct 741656 AATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACG 741715
Query 106576 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAAT 106635
||| ||||||||||||||||| || || | || ||||| || || | | |||||
Sbjct 741716 ATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAAT 741775
Query 106636 TGCCTTCCACA-CATCGGCGGCTGGTACAATGG--CGTTGGCCCGTCCCT-CCGCCTCGT 106691
||| | ||||| | | | || | |||| || | || | ||| | |||||
Sbjct 741776 TGCGTACCACAGTTTTTGTGCCTTG----ATGGTACGACGACCTTTACCTAGCTTCTCGT 741831
Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 106751
|||||||||| || | || || || ||||| | |||||| ||||| || | |
Sbjct 741832 ACTTTGTGTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTAGACCAGGACATTCGC 741891
Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811
|||||| | ||||| ||| | ||| |||| | ||| ||||||||||| | |||||||
Sbjct 741892 TTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAA 741951
Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871
|||| || | || | ||||| ||| ||| || | || || || || |
Sbjct 741952 TCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCA 742011
Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCT 106931
| |||| ||||| | | || | ||||| ||||| | ||| | ||||| || |||
Sbjct 742012 AATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCG 742071
Query 106932 TTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988
|| | || |||||| || || || ||||| || | || || | ||| |
Sbjct 742072 GGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACACACGCAACATGG 742131
Query 106989 GAATAATACCATCTGATTG-ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 107047
| | |||||||| || | | ||| ||||| || |||| || | || | |
Sbjct 742132 GCAAAATACCAT-TGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGTAGCGCGAATG 742190
Query 107048 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 107107
| || || | | |||||||||||||| |||| ||||| ||||||| | | |
Sbjct 742191 TTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTCAAC 742250
Query 107108 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 107167
|| | || || || | ||||| || |||| | | | ||| || |||||||
Sbjct 742251 GTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGAAACATGAGGACATC 742310
Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227
|||| || ||||||||||| | | ||| || | ||||| ||||||| |||
Sbjct 742311 TGCGCCTGAGGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCGTGAACATCTTCTGG 742370
Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287
||| || || |||||||| || | ||||| ||||| ||||| || || |
Sbjct 742371 CTCATAAGTTCATAAGTCTCCAAAACTCGAGGGATGTCATCCCCATGGATTCCAATAGAT 742430
Query 107288 ACACGCATAAACATGT 107303
|||||||||| |||||
Sbjct 742431 ACACGCATAATCATGT 742446
>seq3
Length=2099697
Score = 96.9 bits (106), Expect = 4e-15
Identities = 384/587 (65%), Gaps = 32/587 (5%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
|||||| |||||||||||||||||||||||||| || |||| || || |||||
Sbjct 1028229 TAGTCCGAGACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATG 1028170
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGGG-TGGCACCCCAACTTGTTTGAGGAG 117101
|| ||||| || ||| || | | | |||| |||| ||| ||| |
Sbjct 1028169 AAATCAAAGGGGTTCGCAACGCTGTACACCTTGGGATGGC----CAAGAGCCACGAGCAA 1028114
Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT- 117160
|| || | || |||||||||||| | |||| || | ||||| || | |||
Sbjct 1028113 GCGGTCGGCAACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGA 1028054
Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
||| ||||| || || || ||| | ||||| |||||||||||||| | | ||
Sbjct 1028053 TACG-GGGAGCGCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCC 1027995
Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGA-GCTCCACGGCAAA 117278
| ||| | || | || | || ||| || | |||| | | || | ||||
Sbjct 1027994 GCTCGATGATCTCACGCGACGGGCGGTTTT-CAAGGTGCGTGAACAAGAGGCAAG-CAAA 1027937
Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338
|| || | ||| ||||| || ||||| || ||||| || || || || |||||
Sbjct 1027936 ATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCAT 1027877
Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGC--GCAGAATGACCCGGAGAAGAAGATACCC 117396
||| || |||||||| | ||| | || || || ||| || || ||||||||||| |||
Sbjct 1027876 GAGGCCGCGCTTCTTTAGCCAGAAGAT-GCTTGC-GAAAGAGCCTGAGAAGAAGATCCCC 1027819
Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AAC 117453
|| ||| |||||||| | ||||||||| || || | | |||| ||| | |
Sbjct 1027818 TCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTG---GACTCGCGATCACTGATC 1027762
Query 117454 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAAT 117513
|| || ||||| || ||||| || |||| || || | || | ||||| | ||
Sbjct 1027761 CAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAAC 1027702
Query 117514 AACTGCT---TCT-TTTCAGATCCATCCTTAATGTATTTGTCAATCA 117556
| |||| || |||| | ||||||||| ||| |||||||||
Sbjct 1027701 AGGTGCTGTGCCTCTTTCGG----ATCCTTAATATATGTGTCAATCA 1027659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980770500960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |