Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 1e-18
>seq1
Length=3734243
Score = 111 bits (122), Expect = 1e-18
Identities = 352/543 (65%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| || || ||| | || |||||||| |||||| ||||| ||| || || |||
Sbjct 402170 ATTGGCATTGATCTGGGTACCACATACTCTTGTGTGGGTGTGATGCAGAACGGCCGAGTC 402229
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA---CG 550111
|||||| | || ||||| || || || | | ||||||||||||||| | |||| |
Sbjct 402230 GAAATTCTCGCTAATGACCAGGGCAATCGTATTACTCCATCTTATGTCGCGTTCACCCCT 402289
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| ||| | | ||||||| ||||| || || | ||||| | | |||||| | ||
Sbjct 402290 GACGGTGAGCGTCTAGTTGGAGATGCGGCCAAGAACCAAGCTGCCGCTAATCCATCGAAC 402349
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| ||||||||| || ||| | || || || || || ||| || || |||
Sbjct 402350 ACCATTTTTGATATCAAGCGTATCATCGGCCTAAAGTTCAAGGATAAGAGCGTGCAGAGT 402409
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
||| | ||||||| || || | | | ||||| || || | | || | |
Sbjct 402410 GATCTCAAGCATTTTCCGTTTAAGGTCAGCAGCAAATCTGGCAAGCCAGTTGTGGATGTT 402469
Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351
| | || | | ||||||||| | || ||| | ||| | |||||| |
Sbjct 402470 GAT-TTCAACGGCC--CCAAACAATTTGCCCCTGAAGAGATTAGTGCAATGGTTCTGGGC 402526
Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411
|| ||||| ||| || | || | ||| || | |||||| | || || | ||
Sbjct 402527 AAGATGAAGGAAATCGCTGAAGATTACCTCGGTAAAAAGGTTACGCACGCTGTTGTTACG 402586
Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471
|| || || ||||| || || | ||||| || || ||||| ||||||||| || ||
Sbjct 402587 GTTCCGGCCTATTTCAACGATGCTCAACGCCAGGCGACTAAGGATGCTGGAACGATCGCA 402646
Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531
|| || | ||||| ||| || | || || || ||||| || || ||||||| || |||
Sbjct 402647 GGTCTAACCGTTCTACGTGTTGTGAACGAGCCGACTGCGGCCGCTATTGCATACGGTCTT 402706
Query 550532 GAT 550534
|||
Sbjct 402707 GAT 402709
Score = 95.1 bits (104), Expect = 1e-13
Identities = 315/479 (66%), Gaps = 12/479 (3%)
Strand=Plus/Plus
Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123
||||| ||||| |||||| |||| || || || || || ||||||| || | || | |
Sbjct 1809540 GCCAACGATCAGGGTAACCGAACCACACCCTCATACGTCGCTTTCACTGATTCCGAGCGT 1809599
Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGAT 550183
| | |||||||| || || | || || | || || |||| || | || |||
Sbjct 1809600 CTCATCGGTGATGCTGCTAAGAACCAGGCTGCGATGAACCCGTCCAACACAGTATTCGAT 1809659
Query 550184 GCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCAT 550243
||||| ||| | ||||| | | || | ||| || || ||||||| ||||| || ||
Sbjct 1809660 GCTAAGCGTCTTATTGGCCGTAAGTTCGACGATCCGGCTATTCAGGCTGATATTAAACAC 1809719
Query 550244 TGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTACTCATGAAGG 550302
| || ||| | ||||||| || || || | || | | | | | || ||||
Sbjct 1809720 TTCCCCTTCAAGGTTGTTAACCAGGGAGGTAAGCCGTTCATCCAGGTCGAAT-AT-AAGG 1809777
Query 550303 ATCTGTTAAACAATTT-TCACCAGAACAAATTT-CATCTATGGTTTTAATGAAAATGAAA 550360
| | || | | | || || ||| || | || | ||| || | || |||||
Sbjct 1809778 GTGAGAGCAAGACTCTCTCTCCCGAAGAAGTCAGCAGC-ATGATTCTGGGCAAGATGAAG 1809836
Query 550361 CAAACAGCC-AGT--GCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCA 550417
|||| ||| ||| || | | |||| ||| || | | || || || || || ||
Sbjct 1809837 GAAACCGCCGAGTCCGCACTCGGTGGTAAAG---TTGAGAACGCTGTTATCACCGTTCCT 1809893
Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477
|| || || || || || || ||||||||||| || |||||||| | |||||| || |
Sbjct 1809894 GCTTACTTCAACGATTCTCAGCGTCAAGCTACCAAGGATGCTGGCCTTATTGCCGGTTTG 1809953
Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
|| || | ||||| ||||| || ||||| ||||| || |||| || || ||||| ||
Sbjct 1809954 AACGTGCAGCGTATCATCAACGAGCCTACCGCTGCCGCCATTGCCTACGGTCTTGACAA 1810012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295788461960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |