Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-18 >seq1 Length=3734243 Score = 111 bits (122), Expect = 1e-18 Identities = 352/543 (65%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || ||| | || |||||||| |||||| ||||| ||| || || ||| Sbjct 402170 ATTGGCATTGATCTGGGTACCACATACTCTTGTGTGGGTGTGATGCAGAACGGCCGAGTC 402229 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA---CG 550111 |||||| | || ||||| || || || | | ||||||||||||||| | |||| | Sbjct 402230 GAAATTCTCGCTAATGACCAGGGCAATCGTATTACTCCATCTTATGTCGCGTTCACCCCT 402289 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||| | | ||||||| ||||| || || | ||||| | | |||||| | || Sbjct 402290 GACGGTGAGCGTCTAGTTGGAGATGCGGCCAAGAACCAAGCTGCCGCTAATCCATCGAAC 402349 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || ||||||||| || ||| | || || || || || ||| || || ||| Sbjct 402350 ACCATTTTTGATATCAAGCGTATCATCGGCCTAAAGTTCAAGGATAAGAGCGTGCAGAGT 402409 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||| | ||||||| || || | | | ||||| || || | | || | | Sbjct 402410 GATCTCAAGCATTTTCCGTTTAAGGTCAGCAGCAAATCTGGCAAGCCAGTTGTGGATGTT 402469 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351 | | || | | ||||||||| | || ||| | ||| | |||||| | Sbjct 402470 GAT-TTCAACGGCC--CCAAACAATTTGCCCCTGAAGAGATTAGTGCAATGGTTCTGGGC 402526 Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 || ||||| ||| || | || | ||| || | |||||| | || || | || Sbjct 402527 AAGATGAAGGAAATCGCTGAAGATTACCTCGGTAAAAAGGTTACGCACGCTGTTGTTACG 402586 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || || ||||| || || | ||||| || || ||||| ||||||||| || || Sbjct 402587 GTTCCGGCCTATTTCAACGATGCTCAACGCCAGGCGACTAAGGATGCTGGAACGATCGCA 402646 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || || | ||||| ||| || | || || || ||||| || || ||||||| || ||| Sbjct 402647 GGTCTAACCGTTCTACGTGTTGTGAACGAGCCGACTGCGGCCGCTATTGCATACGGTCTT 402706 Query 550532 GAT 550534 ||| Sbjct 402707 GAT 402709 Score = 95.1 bits (104), Expect = 1e-13 Identities = 315/479 (66%), Gaps = 12/479 (3%) Strand=Plus/Plus Query 550064 GCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACAT 550123 ||||| ||||| |||||| |||| || || || || || ||||||| || | || | | Sbjct 1809540 GCCAACGATCAGGGTAACCGAACCACACCCTCATACGTCGCTTTCACTGATTCCGAGCGT 1809599 Query 550124 TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGAT 550183 | | |||||||| || || | || || | || || |||| || | || ||| Sbjct 1809600 CTCATCGGTGATGCTGCTAAGAACCAGGCTGCGATGAACCCGTCCAACACAGTATTCGAT 1809659 Query 550184 GCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCAT 550243 ||||| ||| | ||||| | | || | ||| || || ||||||| ||||| || || Sbjct 1809660 GCTAAGCGTCTTATTGGCCGTAAGTTCGACGATCCGGCTATTCAGGCTGATATTAAACAC 1809719 Query 550244 TGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTACTCATGAAGG 550302 | || ||| | ||||||| || || || | || | | | | | || |||| Sbjct 1809720 TTCCCCTTCAAGGTTGTTAACCAGGGAGGTAAGCCGTTCATCCAGGTCGAAT-AT-AAGG 1809777 Query 550303 ATCTGTTAAACAATTT-TCACCAGAACAAATTT-CATCTATGGTTTTAATGAAAATGAAA 550360 | | || | | | || || ||| || | || | ||| || | || ||||| Sbjct 1809778 GTGAGAGCAAGACTCTCTCTCCCGAAGAAGTCAGCAGC-ATGATTCTGGGCAAGATGAAG 1809836 Query 550361 CAAACAGCC-AGT--GCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCA 550417 |||| ||| ||| || | | |||| ||| || | | || || || || || || Sbjct 1809837 GAAACCGCCGAGTCCGCACTCGGTGGTAAAG---TTGAGAACGCTGTTATCACCGTTCCT 1809893 Query 550418 GCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTT 550477 || || || || || || || ||||||||||| || |||||||| | |||||| || | Sbjct 1809894 GCTTACTTCAACGATTCTCAGCGTCAAGCTACCAAGGATGCTGGCCTTATTGCCGGTTTG 1809953 Query 550478 AATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 || || | ||||| ||||| || ||||| ||||| || |||| || || ||||| || Sbjct 1809954 AACGTGCAGCGTATCATCAACGAGCCTACCGCTGCCGCCATTGCCTACGGTCTTGACAA 1810012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295788461960