Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 seq1 82.4 6e-11 >seq2 Length=2224469 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 ||||| || ||| |||||||||||||| || || || | || | || || | |||| Sbjct 961543 TGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCCTCTAGCTGC 961484 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| || || ||||| || || | ||| | ||||||||| ||| |||||| Sbjct 961483 TTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGCAATCTTG 961424 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || |||| | | | || || ||| ||||| | |||||| || || ||||| Sbjct 961423 CTCTTGACAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTCTTGCCCGTT 961364 Query 48744 AAAGTTTTTACAAAAATCTGCATCG 48768 | || || || ||||||||||||| Sbjct 961363 AGCGTCTTCACGAAAATCTGCATCG 961339 >seq1 Length=3734243 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| || ||||| || || || | || | || ||||||||||| ||||| || Sbjct 2696295 CTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGGCCATCTTCCAACTGCTTGCCGGCGAA 2696236 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || |||||||| ||||| | || | ||||| |||||| |||||| || || | Sbjct 2696235 AATGAGTCGCTGCTGATCAGGAGGGATACCCTCTTTGTCGGCAATCTTGCTCTTAACGGC 2696176 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | | || || || ||||| | || || || || ||||| | || || || Sbjct 2696175 ATCGATCGTATCCGAACTTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCAC 2696116 Query 48755 AAAAATCTGCATC 48767 |||||||||||| Sbjct 2696115 GAAAATCTGCATC 2696103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937581429292