Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 174 3e-38 >seq3 Length=2099697 Score = 174 bits (192), Expect = 3e-38 Identities = 548/842 (65%), Gaps = 14/842 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||||||| |||| |||||||||||||| ||||| ||| | | |||||| ||||| Sbjct 1028233 CTGGTAGTCCGAGACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTC 1028174 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 |||||| |||||||| | | | |||||| | |||| | | |||| Sbjct 1028173 CATGAAATCAAAGGGGTTCGCAACGCTGTACACCTTGGGATGGCCAAGAGCCACGAGCAA 1028114 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | | || || ||| |||| ||||| | ||||||| | |||||||| | || || Sbjct 1028113 GCGGTCGGCAACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGA 1028054 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||||| | || | ||||| || |||||||| |||| || || || | |||| | Sbjct 1028053 TACGGGGAGCGCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCG 1027994 Query 48079 CTTAACGCGGGACTCT---GAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 || || | ||| || || ||| |||||| || |||| ||| || Sbjct 1027993 CT---CGATGATCTCACGCGACGGGCGGTTTTCAAGGTGCGTGAACAAGAG---GCAAGC 1027940 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 ||| || | |||| ||||| || || || ||| | || || || |||||||| Sbjct 1027939 AAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGG 1027880 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||||| || | || || |||||||| || ||||||||||| ||||||||||| || Sbjct 1027879 CATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCC 1027820 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 ||| || || || ||||| || | |||| | || | | | || |||||| Sbjct 1027819 CTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCGCGATCACTGATCCA 1027760 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 | | |||||| | ||||| || ||||| || || ||||| ||||| ||| || Sbjct 1027759 GCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAACAG 1027700 Query 48376 CTTCT-TGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAG 48434 | || ||| ||| | ||| || ||| || | ||| || ||| |||| | Sbjct 1027699 GTGCTGTGC-CTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGTGAGTAAGTCTCCG 1027641 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | |||||| || ||| ||||| || || || | | |||||| | |||| Sbjct 1027640 AGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCCTCAGGGATTTGCA 1027581 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 |||| ||||| | ||| | ||| ||||| ||||| || || || || || || || | Sbjct 1027580 CTTCACCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGCTGCGAAAA 1027521 Query 48555 AGGCAAGGACATGTTTAAGGA--AATGGCGC-TCGTTGTGGGTGAGAGCATTCCAGCCCT 48611 | || || |||| || || ||| || | || |||| || || | |||| | | Sbjct 1027520 ATGCGAGTACATTCGAAATGAAGAATCGCTCATCCTTGTTCATGCGATTGTCCCAGTCAT 1027461 Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGT 48671 | || || || || || | ||||| |||||||||| || || ||||| || | Sbjct 1027460 TCAAATCCTTACCGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGCTTTCTTAT 1027401 Query 48672 AC 48673 || Sbjct 1027400 AC 1027399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532753423360