Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3 174 3e-38
>seq3
Length=2099697
Score = 174 bits (192), Expect = 3e-38
Identities = 548/842 (65%), Gaps = 14/842 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||||||| |||| |||||||||||||| ||||| ||| | | |||||| |||||
Sbjct 1028233 CTGGTAGTCCGAGACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTC 1028174
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
|||||| |||||||| | | | |||||| | |||| | | ||||
Sbjct 1028173 CATGAAATCAAAGGGGTTCGCAACGCTGTACACCTTGGGATGGCCAAGAGCCACGAGCAA 1028114
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| | || || ||| |||| ||||| | ||||||| | |||||||| | || ||
Sbjct 1028113 GCGGTCGGCAACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGA 1028054
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
||||| | || | ||||| || |||||||| |||| || || || | |||| |
Sbjct 1028053 TACGGGGAGCGCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCG 1027994
Query 48079 CTTAACGCGGGACTCT---GAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135
|| || | ||| || || ||| |||||| || |||| ||| ||
Sbjct 1027993 CT---CGATGATCTCACGCGACGGGCGGTTTTCAAGGTGCGTGAACAAGAG---GCAAGC 1027940
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
||| || | |||| ||||| || || || ||| | || || || ||||||||
Sbjct 1027939 AAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGG 1027880
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||||| || | || || |||||||| || ||||||||||| ||||||||||| ||
Sbjct 1027879 CATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCC 1027820
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315
||| || || || ||||| || | |||| | || | | | || ||||||
Sbjct 1027819 CTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCGCGATCACTGATCCA 1027760
Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375
| | |||||| | ||||| || ||||| || || ||||| ||||| ||| ||
Sbjct 1027759 GCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAACAG 1027700
Query 48376 CTTCT-TGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAG 48434
| || ||| ||| | ||| || ||| || | ||| || ||| |||| |
Sbjct 1027699 GTGCTGTGC-CTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGTGAGTAAGTCTCCG 1027641
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | |||||| || ||| ||||| || || || | | |||||| | ||||
Sbjct 1027640 AGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCCTCAGGGATTTGCA 1027581
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
|||| ||||| | ||| | ||| ||||| ||||| || || || || || || || |
Sbjct 1027580 CTTCACCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGCTGCGAAAA 1027521
Query 48555 AGGCAAGGACATGTTTAAGGA--AATGGCGC-TCGTTGTGGGTGAGAGCATTCCAGCCCT 48611
| || || |||| || || ||| || | || |||| || || | |||| | |
Sbjct 1027520 ATGCGAGTACATTCGAAATGAAGAATCGCTCATCCTTGTTCATGCGATTGTCCCAGTCAT 1027461
Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGT 48671
| || || || || || | ||||| |||||||||| || || ||||| || |
Sbjct 1027460 TCAAATCCTTACCGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGCTTTCTTAT 1027401
Query 48672 AC 48673
||
Sbjct 1027400 AC 1027399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532753423360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |