Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq3 159 6e-34
seq1 129 1e-24
>seq3
Length=2099697
Score = 159 bits (176), Expect = 6e-34
Identities = 560/864 (65%), Gaps = 32/864 (4%)
Strand=Plus/Plus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || ||| || ||| ||||| || | ||| |||||| |||||||||||||||
Sbjct 1027385 GAAATTTGGCAGGCGTATAAGAAAGCGGAGGCCTCTTTCTGGACTGCCGAAGAGATTGAT 1027444
Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATC--CAAAGACGAGCAGCATTTTC-T 25589
|| | ||||| || | | |||| || || || ||| || |||| | | ||| |
Sbjct 1027445 CTCGGTAAGGATTTGAATGACTGGGACAATCGCATGAACAAGGATGAGC-GATTCTTCAT 1027503
Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649
| | || | ||||| || |||||||| || || || || |||||||| ||| ||
Sbjct 1027504 TTCGAATGTACTCGCATTTTTCGCAGCCTCCGACGGCATTGTCAACGAGAACCTGGTTGA 1027563
Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709
| | ||| | | |||||||| | ||||| |||||||| || || ||||| ||
Sbjct 1027564 GCGGTTCTCTGGTGAAGTGCAAATCCCTGAGGCAAAGTGTTTTTATGGATTCCAAATCAT 1027623
Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA 25766
|| || ||| | ||||| ||| || | || ||||| || || |||| ||
Sbjct 1027624 GATGGAGAATATTCACTCGGAGACTTACTCA---CTCCTGATTGACACATATATTAAGGA 1027680
Query 25767 CGTCGCCGAGAGAG----ATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGA 25822
|||| |||| | | ||||| |||||| ||| ||| ||| |||| |
Sbjct 1027681 T----CCGAAAGAGGCACAGCACCTGTTCAATGCCATTGAGACCATTCCCTGCATTGCTA 1027736
Query 25823 GGAAGGCGCGGTGGGCCATGAAGTGGATCAAC-AGCCAGAGCGCTACGTTTGGCGAGCGG 25881
||||| |||||| || ||||||| | | ||| | || |||| |||||
Sbjct 1027737 AAAAGGCTAAGTGGGCGTTGCGCTGGATCAGTGATCGCGAGTCC-ACATTTGCAGAGCGC 1027795
Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941
|| || || ||||||||||| ||||| ||||| ||| || || || || |||||||
Sbjct 1027796 CTTGTGGCGTTTGCTGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTC 1027855
Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGCAG 26000
||||| ||| || || |||||| || || ||| ||||| || ||||| || |
Sbjct 1027856 TGGCTAAAGAAGCGCGGCCTCATGCCTGGTCT-TACATTTTCTAATGAGCTAATTTCTCG 1027914
Query 26001 GGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA 26060
|| || ||| | || | |||||||| ||||| | | |||| ||| | ||
Sbjct 1027915 CGATGAAGGTATGCATACTGATTTTGCTTGCCTCTTGTTCACG---CACCTTGAAAACCG 1027971
Query 26061 ACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120
|| || | |||| | || | | || |||| ||||| || |||||||||||||| ||
Sbjct 1027972 CCCGTCGCGTGAGATCATCGAGCGGATTATCACTGAGGCGGTTGAGATCGAGAAGGAATT 1028031
Query 26121 TCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAA--CAACAGACTCATGAGCCAA 26178
| |||||||||| ||| || |||||| ||||
Sbjct 1028032 CCTCACTGATGCGCTCCCCGTATCTCTTTTGGGCATGAATGCAA-AG-CTCATGTGCCAG 1028089
Query 26179 TACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAG 26237
|||||||||| || ||||||| |||| ||| | || || | ||| | |||||
Sbjct 1028090 TACATTGAGTTCGTTGCCGACCGCTTGCTCGTGGC-TCTTGGCCATCCCAAGGTGTACAG 1028148
Query 26238 TACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTT 26297
| ||||| || || || ||||| || || ||| | | || ||||||||||||||
Sbjct 1028149 CGTTGCGAACCCCTTTGATTTCATGGAGAATATCTCGCTTGCGGGTAAGACCAACTTCTT 1028208
Query 26298 TGAAAAGAGGGTCGGCGACTATCA 26321
||| ||| | ||| ||||| ||
Sbjct 1028209 TGAGAAGCGAGTCTCGGACTACCA 1028232
>seq1
Length=3734243
Score = 129 bits (142), Expect = 1e-24
Identities = 282/420 (67%), Gaps = 3/420 (1%)
Strand=Plus/Plus
Query 221782 CTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCAT 221841
|||||| || |||| || || || |||||||| ||||||||||| ||||||||||||||
Sbjct 741680 CTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACGATTGGCAGCATCCTTGTAGAGCAT 741739
Query 221842 AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCT 221901
| | ||| || ||||| || || | ||||| || ||| |||| | || |
Sbjct 741740 ATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTGCCTT 741799
Query 221902 CACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTT 221961
| || | || ||| | | ||| || ||| || || ||| || || |
Sbjct 741800 GATGGTACGACGACCTTTACC-TAG--CTTCTCGTACTTTGTGTACAGCTCCTCGAATTC 741856
Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTT 222021
||||| ||| | ||| | || || ||||| | |||||||| ||| |||| |
Sbjct 741857 GTCACCATACACGTCGGCTAGACCAGGACATTCGCTTGGACACATAAGAGTCCAATCTCC 741916
Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081
| ||||| || | || |||||| | || || ||||| || || | || | |||||
Sbjct 741917 ATCCTCTTTAACGCGCTTCATGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCG 741976
Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141
| || |||||| || | ||||||| || ||| | ||||||||| | |||| |
Sbjct 741977 CGCACGAATCTCCTCTTTTCCATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATC 742036
Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
||||||||||| | ||| | || | ||| || || ||||| ||||| || ||||||||
Sbjct 742037 ATGCCACGGCTCTAAATAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCAC 742096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844753557760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |