Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 1e-17
>seq1
Length=3734243
Score = 104 bits (114), Expect = 1e-17
Identities = 278/417 (67%), Gaps = 6/417 (1%)
Strand=Plus/Plus
Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989
|| ||| || |||||||||||||| | ||| |||||||||| ||| | || || ||
Sbjct 741932 CTTCATGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTC 741991
Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049
|||||| ||||| || | ||| | || ||||| | || ||||| || |||||
Sbjct 741992 TTTTCCATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAA 742051
Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109
||| || || ||| ||| | || || |||||||| ||||||| || || |
Sbjct 742052 ATAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATT 742111
Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCT 26168
|||| | || |||||| || | ||| | ||| | |||||||| | | ||| |
Sbjct 742112 ATTGTACACACGCAACATGGGCA-AAATACCATTGCTGGTACCGTTTGTTCCAGCAATAT 742170
Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228
|| ||||| | | ||| | |||| || | ||| || || ||||| | || || |
Sbjct 742171 ATGAGCCTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGA 742230
Query 26229 T-AGCTGCACAA-TCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCC 26286
| ||| |||||| ||| ||| |||||| |||| |||| || |||| | | ||||
Sbjct 742231 TGAGC-GCACAAGTCTTCAAC-GTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTG 742288
Query 26287 TAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGG 26343
| || ||||| || || | |||| |||| || || | |||| | || || ||
Sbjct 742289 AACCAAGAAACATGAGGACATCTGCGCCTGAGGCGTACCAGCATTATACAAGGTAGG 742345
Score = 82.4 bits (90), Expect = 4e-11
Identities = 116/163 (71%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
|| ||||| || | |||||| || ||| | | || || | ||| |||||||||||
Sbjct 1279665 ATCTGGACTAAAAAGATGCCACTCCTCATCTGCTTGTACCTTTTTCATGAATAAATCTGG 1279606
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|| ||| | ||||| || || |||| || | ||| || || ||||| ||||||||
Sbjct 1279605 AACCCATAGAGCATAGAACAAGTCTCGTGCGCGGTATTCGTCCTTGCCGTGGTTCTTTTT 1279546
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAA 26050
|| ||| ||||| ||| || || | |||||||| ||||||
Sbjct 1279545 TAAATCCAAGAAGGCAAGTATGTCCGCATGCCATGGCTCTAAA 1279503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039987664300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |