Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1 104 1e-17 >seq1 Length=3734243 Score = 104 bits (114), Expect = 1e-17 Identities = 278/417 (67%), Gaps = 6/417 (1%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || |||||||||||||| | ||| |||||||||| ||| | || || || Sbjct 741932 CTTCATGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTC 741991 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 |||||| ||||| || | ||| | || ||||| | || ||||| || ||||| Sbjct 741992 TTTTCCATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAA 742051 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 ||| || || ||| ||| | || || |||||||| ||||||| || || | Sbjct 742052 ATAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATT 742111 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCT 26168 |||| | || |||||| || | ||| | ||| | |||||||| | | ||| | Sbjct 742112 ATTGTACACACGCAACATGGGCA-AAATACCATTGCTGGTACCGTTTGTTCCAGCAATAT 742170 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228 || ||||| | | ||| | |||| || | ||| || || ||||| | || || | Sbjct 742171 ATGAGCCTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGA 742230 Query 26229 T-AGCTGCACAA-TCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCC 26286 | ||| |||||| ||| ||| |||||| |||| |||| || |||| | | |||| Sbjct 742231 TGAGC-GCACAAGTCTTCAAC-GTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTG 742288 Query 26287 TAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGG 26343 | || ||||| || || | |||| |||| || || | |||| | || || || Sbjct 742289 AACCAAGAAACATGAGGACATCTGCGCCTGAGGCGTACCAGCATTATACAAGGTAGG 742345 Score = 82.4 bits (90), Expect = 4e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 || ||||| || | |||||| || ||| | | || || | ||| ||||||||||| Sbjct 1279665 ATCTGGACTAAAAAGATGCCACTCCTCATCTGCTTGTACCTTTTTCATGAATAAATCTGG 1279606 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 || ||| | ||||| || || |||| || | ||| || || ||||| |||||||| Sbjct 1279605 AACCCATAGAGCATAGAACAAGTCTCGTGCGCGGTATTCGTCCTTGCCGTGGTTCTTTTT 1279546 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAA 26050 || ||| ||||| ||| || || | |||||||| |||||| Sbjct 1279545 TAAATCCAAGAAGGCAAGTATGTCCGCATGCCATGGCTCTAAA 1279503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039987664300